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Record W6930689939 · doi:10.5281/zenodo.14509868

Pleurobranchidae Gray 1827

2023· article· en· W6930689939 on OpenAlexaboutno aff

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2023
Typearticle
Languageen
FieldPsychology
TopicPsychological Testing and Assessment
Canadian institutionsnot available
Fundersnot available
KeywordsMonophylyCladeParaphylySystematicsMediterranean climateTaxonomy (biology)

Abstract

fetched live from OpenAlex

Systematics of Pleurobranchidae Although not supported in the ML and BI phylogenies, Pleurobranchidae is for the first time recovered as a clade in our analyses. All valid, representative genera within the family are for thefirsttimepresent, namely Bathyberthella, Berthella, Berthellina, Boreoberthella, Pleurehdera, and Pleurobranchus. Berthella is consistently found paraphyletic and four clades classifiable as three different genera are recovered. Bearing that in mind, most genera are found monophyletic with maximum support, although how genera are related to each other is not always well supported. Berthellina is recovered monophyletic with full support, the species B. edwardsii (Vayssière, 1897) from the Mediterranean and Eastern Atlantic (94.3–99% identity) is the sister-group to the Indo-Pacific species. The latter group is composed of B. citrina (Rüppell and Leuckart, 1828) from the Red Sea (100% identity), B. punctata (Quoy and Gaimard, 1832) from Australia, and a clade of B. delicata (Pease, 1861) species with probabl hidden speciation spanning from the Red Sea, the Maldives (Fig. 1E), and Hawaii (90.7–93.6% identity). All Bathyberthella antarctica Willan and Bertsch 1987 (Fig. 1F) specimens from across the Weddell Sea and the Scotia Arc conformed to a monophyletic clade (bs = 100, pp = 1) with a 95–100% identity. A clade containing Berthella perforata (Philippi, 1844) specimens from Italy (99.1–100% identity) and the type species of Berthella, B. plumula (Montagu, 1803), with specimens from the Northeast Atlantic and the Mediterranean Sea (98.7–100% identity) was fully recovered only in the ML analysis (bs = 100). This clade also included B. ocellata (Delle Chiaje, 1830) from Greece (Fig. 1G), B. medietas Burn, 1962 from Australia, B. sideralis Lovén, 1846 from Sweden, and B. platei (Bergh, 1898) from 15 m depth Chile and 250 m depth in the Falkland Islands (99.3– 99.5% identity). A second ‘ Berthella’ clade (bs = 99, pp = 1) is largely composed of the B. stellata (Risso, 1826) group agreeing to the recently recognized species in Ghanimi et al. (2020b) yet adding some more complexity. The B. stellata (Fig. 1I) group is found in tropical and temperate waters from the Eastern Pacific, Caribbean, and Mediterranean seas, including B. andromeda Ghanimi, Schrödl, Goddard et al., 2020, B. strongi (MacFarland, 1966), B. nebula Ghanimi et al., 2020, and B. vialactea Ghanimi et al., 2020. This latter group is sister to a Pacific one composed of B. pellucida (Pease, 1860) from Hawaii, B. cf. postrema from New Caledonia, our newly sequenced B. cf. ‘ stellata ’ from Japan, and Pleurehdera haraldi Ev.Marcus and Er.Marcus, 1970 from Palmyra Atoll in the middle of the Pacific. Since Pleurehdera haraldi is the type and only species of the genus and nests within this second ‘ Berthella ’ clade, we suggest transferring all the above-mentioned species to the genus Pleurehdera. Interestingly, only in the BI analysis, a sister relationship between specimens belonging to Berthella s.s. and the Pleurehdera clade was recovered yet without full support (pp = 0.95). Sister to both B. stellata and the Pacific group we found B. martensi (Pilsbry, 1896), with specimens from Australia and the Pacific side of Panama (99.3% identity) and a likely hidden species from the Maldives (c. 85% identity) (Fig. 1H). This clade deserves the erection of a new genus (see Systematic description). A fourth ‘ Berthella ’ clade (bs = 92, pp = 0.99) is composed of the North Pacific clade that includes specimens of Berthella californica (Dall, 1900) from California to Panama, two specimens of Boreoberthella augusta Martynov and Schrödl 2009 (Fig. 1J) from Japan (100% identity), and Berthella chacei (J.Q.Burch, 1944) from Russia, Canada, and the USA (99–99.7% identity). Given the present phylogenetic scenario and the morphological characters discussed below, we hence establish Boreoberthella californica comb. nov. (Fig. 1K) and Boreoberthella chacei comb. nov. Finally, we recovered a monophyletic clade of Pleurobranchus species (bs = 100, pp = 1) (Fig. 1L), containing the type species P. peronii Cuvier, 1804 and mainly recovering the species groups already studied by Goodheart et al. (2015).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.015
Threshold uncertainty score0.051

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0000.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0150.005

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.102
GPT teacher head0.343
Teacher spread0.241 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2023
Admission routes1
Has abstractyes

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