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Blue light inhibition of hyphal tip growth of Rhizopus arrhizus

2020· article· en· W6939241678 on OpenAlexaboutno aff

Bibliographic record

VenueFigshare · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicFungal and yeast genetics research
Canadian institutionsnot available
Fundersnot available
KeywordsBlue lightOrganelleRhizopus arrhizusRhizopusHyphaFluorescence microscopeFluorescence

Abstract

fetched live from OpenAlex

Abstract In a previous experiment we found that blue light inhibited organelle movements. In this study we investigate if blue light has effects on hyphal tip growth in a very fast-growing fungus R. arrhizus. Already short time irradiation with blue light typical for FITC or GFP excitation (450-490 nm). Inhibits fungal tip growth. If the irradiation is short less than 30 seconds the tip growth rate recovers relatively fast. Blue light excitation could therefore create artefacts in fluorescence microscopy if organelle dynamics are investigated. Comment: This work was originally presented as a poster at Fifth International Mycological Congress, Vancouver, BC, Canada, August 14 - 21, 1994.It is now made available as a preprint since colleagues have asked for the data. NOTE: This preprint can be cited but citation year should be 1995 since the citations and the discussion has not been updated. Anyone thinking this work is worth publishing with peer review should feel free to help me update it. Contact me first and I will then make you first author for the submission if you are interested.Email: stefan@olssonstefan.com

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.250
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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