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Record W6939519395 · doi:10.6084/m9.figshare.26612651

Additional file 1 of Inhibiting NLRP3 inflammasome signaling pathway promotes neurological recovery following hypoxic-ischemic brain damage by increasing p97-mediated surface GluA1-containing AMPA receptors

2024· article· en· W6939519395 on OpenAlexaff

Bibliographic record

VenueOpen MIND · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicInflammasome and immune disorders
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsWestern blotBlotInflammasomeAMPA receptorReceptorBrain damageNorthern blotStaining

Abstract

fetched live from OpenAlex

Additional file 1: Figure S1. The NLRP3−/− and caspase-1−/− mice were genotyped by PCR with reverse transcriptase using mouse tail-tip DNA and mixed primers. The protein levels of NLRP3 and caspase-1 were assessed by Western blot in the brain tissues from WT, NLRP3−/− and caspase-1−/− mice. a The results of PCR showed a band of 666 bp in WT mice, and a band of 850 bp in NLRP3−/− mice. The results of Western blot showed no NLRP3 expression in NLRP3−/− mice. b The results of PCR showed a band of 500 bp in WT mice, and a band of 300 bp in caspase-1−/− mice. The results of Western blot showed no caspase-1 and clv-caspase-1 expression in caspase-1−/− mice. Figure S2. Co-IP assays show no interaction between GluA2 and p97 in the primarily cultured neurons with or without OGD treatment. Figure S3. TTC staining shows an improvement of infarction caused by HI with the treatment of AC-YVAD-CMK. a Representative TTC staining coronal brain sections (2 mm). Sections are labeled as five different levels (level 1–level 5) along the anterior (A) to posterior (P) axis. b Quantification of the cerebral infarct area in brain sections (infarcted area ratio (%) = white infarcted area/brain slice area).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.025
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.929
Threshold uncertainty score0.101

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.025
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0030.002
Bibliometrics0.0020.004
Science and technology studies0.0020.001
Scholarly communication0.0030.003
Open science0.0030.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.9290.204

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.232
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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Same venueOpen MINDSame topicInflammasome and immune disordersFrench-language works237,207