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Record W6946486777 · doi:10.32113/wcrj_20231_2472

Co-expression of tumor suppressor p53 (TP53) and cancer testis antigens (CTAs) as the possible indicator of “cancer-free” status

2023· article· en· W6946486777 on OpenAlexaff

Bibliographic record

VenueDOAJ (DOAJ: Directory of Open Access Journals) · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCell Image Analysis Techniques
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsSuppressorBiomedicineCancerAntigenBiomarkerCorrelation

Abstract

fetched live from OpenAlex

Objective: Biomarkers are biological substances that can be measured and objectively evaluated as indicators of concrete processes at different levels. Advances in biomedicine facilitated the use and importance of biomarkers for healthcare purposes. Several biomarkers that are used in the field of oncology are already identified and used in clinical practice, although their sensitivity is not sufficient. To contribute to this issue, we aimed to determine the expression of total cancer-testis antigens (CTAs) in correlation with the expression levels of tumor suppressor proteins p53 (TP53) and p63 (TP63) as well as BRCA1 in a healthy cohort. Materials and Methods: We analyzed samples of 90 blood donors (28, 31.1% – females, 62, 68.9% – males) as they can be considered as an appropriate group for recruiting health cohorts. The age distribution of the subjects was between 20 and 60 years. The enzyme linked immunosorbent assay analysis was used for the determination of CTAs, TP53, TP63, and BRCA1 expression levels. Results: A strong correlation between CTAs and TP53 expression levels has been revealed. The expression variables of targeted biomarkers are not equally distributed. The data specific to CTAs, TP53, and TP63 expression levels are skewed to the left. In the case of BRCA1, the data may indicate the presence of 2 subgroups for study subjects. Conclusions: The co-expression of CTAs and TP53 may be considered as the indicator of “cancer-free” status. This parameter may be piloted for cancer screening and early diagnosis purposes. However, the role of CTAs for cellular process regulation and especially regulation of tumor suppressor gene p53 shall be investigated further.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.078
GPT teacher head0.511
Teacher spread0.433 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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