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Record W6948778836 · doi:10.5281/zenodo.1212457

dicompyler/dicompyler-core: v0.5.6

2023· other· en· W6948778836 on OpenAlexaff

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2023
Typeother
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomics and Phylogenetic Studies
Canadian institutionsUniversité LavalFisheries and Oceans Canada
Fundersnot available
KeywordsNucleofectionHyporeflexiaSubpoenaFusible alloyProteogenomicsDysgeusia

Abstract

fetched live from OpenAlex

0.5.6 (2023-05-08) :warning: This version will be the last version to support Python 2.x and support will be dropped in version 0.5.7. Dropped support for Python 3.5 & 3.6 and added support for Python 3.9 & 3.10. Made changes to codebase to support recent versions of numpy, Shapely and scikit-image dependencies. Added dose module with DVH class for Pythonic access to RT Dose. (#164) @cutright Added decubitus orientation and related changes. (#285) @darcymason Fix a bug if Pixel Data attribute was set for non image based SOP Classes (i.e. RT Structure Set). (#214) @cutright dvhcalc Implement interpolation for non square pixels in DVH calculation. (#124) Fix a bug where the DVHDoseScaling attribute was not applied properly to RT Dose DVHs. (#301) @cvelten Fix a bug where floating point pixel spacing wasn't rounded in DVH calculations. (#318) @smichi23 dose Added RT Dose grid summmation with interpolation (from DVHA). (#164) @cutright dicomparser Initial implementation of memory mapped access to pixel data. (#131) Ensure that all files read have a valid File Meta header. New Contributors @cutright made their first contribution in https://github.com/dicompyler/dicompyler-core/pull/164 @darcymason made their first contribution in https://github.com/dicompyler/dicompyler-core/pull/170 @smichi23 made their first contribution in https://github.com/dicompyler/dicompyler-core/pull/318 @cvelten made their first contribution in https://github.com/dicompyler/dicompyler-core/pull/301 Full Changelog: https://github.com/dicompyler/dicompyler-core/compare/v0.5.5...v0.5.6

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.011
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Software · Consensus signal: Software
Teacher disagreement score0.500
Threshold uncertainty score0.714

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.011
Meta-epidemiology (narrow)0.0030.003
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0030.001
Science and technology studies0.0010.001
Scholarly communication0.0050.005
Open science0.0060.005
Research integrity0.0030.004
Insufficient payload (model declined to judge)0.5000.410

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.248
Teacher spread0.214 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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