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Record W6949001534 · doi:10.5281/zenodo.12537467

joshspeagle/dynesty: v2.1.4

2024· other· en· W6949001534 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueEdinburgh Research Explorer (University of Edinburgh) · 2024
Typeother
Languageen
FieldEnvironmental Science
TopicSpecies Distribution and Climate Change
Canadian institutionsUniversité de MontréalPerimeter InstituteUniversity of Toronto
Fundersnot available
KeywordsFixed pointCode (set theory)Function (biology)Transformation (genetics)Point (geometry)

Abstract

fetched live from OpenAlex

This is bug-fix release. The main user-visible changes is that npdim= option of dynesty is removed. Also because of the code change, you will not be able to resume previous dynesty runs from earlier (<2.1.3) dynesty versions. Detailed changelog is below: Get rid of npdim option that at some point may have allowed the prior transformation to return higher dimensional vector than the inputs. Note that due to this change, restoring the checkpoint from previous version of the dynesty won't be possible) (issues #456, #457) (original issue reported by @MichaelDAlbrow, fixed by @segasai ) Fixed Fix the way the additional arguments are treated when working with dynesty's pool. Previously those only could have been passed through dynesty.pool.Pool() constructor. Now they can still be provided directly to the sampler (not recommended) ( #464 , reported by @eteq, fixed by @segasai ) change the .ptp() method to np.ptp() function as it is deprecated in numpy 2.0 ( #478 , reported and patched by @joezuntz) Fix an error if you use run_nested() several times (i.e. with maxiter option) while using blob=True. ( #475 , reported by @carlosRmelo)

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.867
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.002
Science and technology studies0.0000.002
Scholarly communication0.0000.000
Open science0.0010.002
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.8770.010

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.098
GPT teacher head0.311
Teacher spread0.213 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it