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Record W6950060240 · doi:10.5281/zenodo.6302389

Umbilicaria rhizinata Krzewicka 2010

2022· article· en· W6950060240 on OpenAlexaboutno aff

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsnot available
Fundersnot available
KeywordsHolotypeReticulateMorphology (biology)Genus

Abstract

fetched live from OpenAlex

Umbilicaria rhizinata (Frey & Poelt) Krzewicka (2010: 491) Mycobank no. 548351 Umbilicaria decussata (Vill.) Zahlbr. var. rhizinata Frey & Poelt (Poelt 1977: 419). Type:— NEPAL. Mahalangur: Himal Khumbu, Moränen des Lobuche-Gletschers bei Lobuche, elev. 4950–5000 m, September 1962, J. Poelt L247a (lectotype M–0035585!; isolectotype M–0035586!). Umbilicaria aprina Nyl. var. halei Llano (1956: 183), syn. nov. Type:— CANADA. N.W.T.: Baffin Island, head of Clyde Fiord, on exposed gneiss boulders, 26 August 1950, M. E. Hale 450 (holotype MIN–664956!, Fig. 1). The holotype specimen of U. aprina var. halei has a similar morphology to the Himalayan U. rhizinata: small size, dark grey granulate upper surface, lower surface covered with black patches of thalloconidia in the central part only, and scarce dichotomous pale rhizinomorphs (Fig. 1). Thalloconidia are sphaerical to ellipsoid, brown to dark brown 3- or 4-celled when mature, but often also 2- or rarely 1-celled (Fig. 2). The sizes were (12.6–)15.0–16.2–17.5(–18.7) × (10.7–)12.6–13.7–14.9(–16.5) μm for (3-)4-celled (n=25), (11.6–)12.8–13.7–14.9(–16.5) × (8.0–)8.7–9.7–10.7(–11.7) μm for 2-celled (n=25), and (8.1–)9.3–10.3–11.4(–12.0) × (7.6–)8.5–9.5–10.6(–11.4) μm for 1-celled thalloconidia (n=25). The wall was 1.3–1.8(2.8) μm. The average size for all types of thalloconidia is 10.9–13.6–16.4 × 8.8–11.0– 13.2 μm which agrees well with the data presented by Krzewicka (2010) for U. rhizinata. All the remaining characters of U. aprina var. halei also perfectly fit the circumscription of U. rhizinata, except, none of the three specimens of the U. aprina var. halei holotype has a distinct reticulate pattern at the centre. They are coarsely pruinose with crystals positioned centrally near the umbo, but lack a reticulate pattern. Additionally, examined specimens from the Altai Mts. are only occasionally reticulate at the centre. This can be explained by the smaller size of both the holotype and the Altaian specimens (0.8–1.3 cm v. 1–2(–3) cm of U. rhizinata). As has been shown in phylogenies (Davydov et al. 2017), U. rhizinata is closely related to U. aprina, and only distantly related to U. decussata, which consistently possesses this reticulate pattern. Therefore, this character should be used with care as a diagnosis for U. rhizinata. Thus, it is proposed that U. aprina var. halei be reduced to synonymy with U. rhizinata. Umbilicaria rhizinata resembles immature U. aprina, but differs in its 3–4 celled thalloconidia. Due to the different conception of U. aprina var. halei by Wei & Jiang (1993) who did not pay attention to thalloconidium septation, material cited by them should be re-identified. Based on the information on the apothecia of U. aprina var. halei given in Wei & Jiang (1993) their material probably belongs to U. aprina. Umbilicaria rhizinata was previously known from Nepal and Stanovoye Nagor’e Highlands (South Siberia, Russia) in Asia, Tanzania in Africa, and Bolivia in South America (Poelt 1977, Krzewicka 2010, Davydov et al. 2019a). Further populations in the Altai Mts. both in Russia and China are recorded here. So, we have at least one verified locality for China – in Xinjiang. Selected specimens examined. RUSSIA. Altai Territory: Altai Mts., Korgonsky range, headwaters of Sentelek River, 51°03’ N, 83°43’ E, elev. 1900–2200 m, mountain tundra, 19 August 1996. E. A. Davydov 5350 (ALTB); Republic of Altai: Katunsky range, Ak-Kem River, stone fields and rocks, 49°59’15.6’’ N, 86°35’09.3’’ E, elev. 2686 m, 9 August 2009. E. A. Davydov 6879 (ALTB).— CHINA. Xinjiang: South Altai range, 49°01’41’’ N, 86°50’38’’ E, elev. 2300–2600 m, 17 July 2007. Davydov 6542 (ALTB).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.014
Threshold uncertainty score0.047

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0000.001
Open science0.0000.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0140.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.224
Teacher spread0.203 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2022
Admission routes1
Has abstractyes

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