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Record W6950381854 · doi:10.5281/zenodo.7815323

Marasmius auranticapitatus J. S. Oliveira 2022, sp. nov.

2022· article· en· W6950381854 on OpenAlexaff

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2022
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicMycorrhizal Fungi and Plant Interactions
Canadian institutionsRoyal Ontario Museum
Fundersnot available
KeywordsPileusOrange (colour)Extant taxonTaxonomy (biology)Basidiomycota

Abstract

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Marasmius auranticapitatus J.S. Oliveira, sp. nov. (Figs 9A; 10) Differs from M. haematocephalus by having pale orange pileus and slightly larger basidiospores (xmm = 21.1 [± 0.7] × 3.8 [± 0.3] µm, Qmm = 5.7 [± 0.5] vs xmm = 20.5 [± 0.3] × 3.9 [± 0.2] µm, Qmm = 5.2 [± 0.1]); and more distinctly larger than those of the rose or pale red piliated M. rubicundus (xmm = 21.1 [± 0.7] × 3.8 [± 0.3] µm, Qmm = 5.7 [± 0.5] vs xmm = 18.9 [± 0.5] × 3.8 [± 0.1] µm, Qmm = 5 [± 0.2]). HOLOTYPE. — Brazil. São Paulo State, Santo André City, Reserva Biológica de Paranapiacaba, 2.XII.2009, M. Capelari & L.A.S. Ramos 4554 (holo-, SP[SP 445584]!). ADDITIONAL EXAMINED MATERIAL. — Brazil. São Paulo State, Santo André City, Reserva Biológica de Paranapiacaba, 16.III.2010, J.J.S. Oliveira JO42 (SP[SP 445408]!); 15.X.2010, J.J.S.Oliveira & C.L.A. Pires JO224 (SP[SP 445445]!); 16.X.2010, J.J.S. Oliveira & C.L.A. Pires JO226 (SP[SP 445446]!); 7.XI.2010, J.J.S.Oliveira & A. V. Costa JO276 (SP[SP 445460]!): J.J.S. Oliveira & A. V. Costa JO277 (SP[SP 445461]!); J.J.S. Oliveira & A. V. Costa JO279 (SP[SP 445463]!); 7.XII.2010, J.J.S. Oliveira, A. V. Costa & P.O. Ventura JO282 (SP[SP 445465]!); J.J.S. Oliveira & P.O. Ventura JO300 (SP[SP 445479]!). ETYMOLOGY. — Based on the orange pileus. MYCOBANK. — MB 842535. HABIT AND SUBSTRATE. — Marasmioid (Figs 9A; 10A), dispersed to gregarious on dead eudicotyledonous leaves in the forest litter. DESCRIPTION Pileus 2.4-19 mm diam.(Figs 9A; 10A), initially conical, then campanulate or hemispherical, sulcate, sometimes deeply sulcate, center flat or slightly umbonate, wrinkled when dried, margin decurved, edge entire; when young deep reddish orange (N 10 Y 80 M 30 to N 10 Y 99 M 60, N 40 Y 70 M 70), with center dark orange (N 10 Y 99 M 70), becoming yellowish orange or pale orange (N 00 Y 80 M 30, N 10 Y 99 M 50 to N 20 Y 60 M 50) when mature, sometimes with beige hue (N 00 Y 40-60 M 20-40 to N 10 Y 50 M 50-60) or ferruginous orange (N 20 Y 99 M 60) to reddish brown (N 20 Y 50 M 50) when dried, keeping the same pigmentation at the center or becoming chestnut orange (N 30 Y 99 M 50-70, N 40 Y 99 M 80 or N 50 Y 99 M 70); membranous, context thin (<1 mm); glabrous, dry, dull, subvelutinous, non-hygrophanous. Lamellae (Fig. 9A) Free, subfree to narrowly adnate, subdistant to distant, L = 9-14, equal, simple, rarely biforked or intervenose, l = 0, smooth, pale cream (N 00 Y 10 M 00), edge even, non-marginate, interlamellar hymenium concolorous with the lamellae faces. Stipe (Figs 9A; 10A) 9-56 × 0.3-0.8 mm, central, filiform, thin, equal, regular, with circular caliber, chitinous, flexible, hollow, apex whitish pink (N 00 Y M 20-60) to pale orange, becoming orange or amber brown (N 40 Y 60 M 50) to brown or dark brown (N 70 Y 99 M 60) toward the base, glabrous, smooth, with a silky bright; with a scarce, cream, tomentose basal mycelium. 10-40 Odor Not distinctive. Basidiospores (Fig. 10B) 17.1-24.8 × 2.8-5 µm (xrm = 19.4-22.3 × 3.5-4.2 µm; xmm = 21.1 [± 0.7] × 3.8 [± 0.3] µm; Qrm = 5.1-6.3; Qmm = 5.7 [± 0.5], n / s = 30/8), exceptional spore size of JO226 with 17-21.9 × 3-4.2(-5) µm (xm = 19.4 [± 1.0] × 3.6 [± 0.4] µm; Qm = 5.4 [± 0.7]; n / s = 30, s = 1), oblong, subclavate to fusoid, smooth, hyaline, thin-walled, inamyloid. Basidia Observed in JO279, 20.1-30.4 × 6-7.6 µm, clavate, hyaline, thin-walled, inamyloid, 4-sterigmate, sterigmata coarse or broad, with obtuse apex. Basidioles (Fig. 10C) 21.3-28.8 × 6-8.8 µm, clavate, hyaline, thin-walled, inamyloid. Pleurocystidia (Fig. 10D) (15.1-)22.3-74.3 × 5.2-12.1 µm, clavate, with tapered apex, subacuminate, vesiculose, capitate or papillate, sublageniform, hyaline, thin-walled, refractive. Cheilocystidia (Fig. 10E) Similar to the Siccus-type broom cells of the pileipellis; main body (10-)15-18.8 × 5.6-11.3 µm, clavate to turbinate, hyaline, thin-walled; setulae apical, erect, 2.5-7.5 × 0.8-1.8 µm, cylindrical, regular in outline, solid, apex acute. Lamellar trama Dextrinoid, irregular, interwoven, hyphae cylindrical, 1.6- 10 µm diam., regular in outline, branched, smooth, hyaline, thin-walled. Pileus trama Similar to the lamellar trama, hyphae 2-6.3 µm diam. Pileipellis Hymeniform, composed of Siccus-type broom cells (Fig. 10F), abundant, pale yellow when grouped; main body 9.4- 18.8 × 7-10.6 µm, clavate to frequently turbinate, sometimes inflated, or irregular in outline, hyaline,thin-walled, weakly dextrinoid; setulae apical, erect, 3.8-7.5 × 0.6-1.3 µm, filiform,thin, regular in outline, sometimes branched,solid,hyaline, apex acute. Stipe trama Dextrinoid, cortical hyphae parallel, 3-13.8 µm diam., cylindrical, regular in outline, rarely branched, smooth, pale brown, thick-walled; internal hyphae 2.5-7.5 µm diam., hyaline, thin-walled. Clamp connections Present in all tissues. REMARKS Marasmius auranticapitatus J.S. Oliveira, sp. nov. is very similar to M. haematocephalus (blood red pileus) but has more pale yellowish orange pileus (reddish when young) and slightly longer basidiospores (xmm = 21.1 [± 0.7] × 3.8 [± 0.3] µm, Qmm = 5.7 [± 0.5] vs xmm = 20.4 [± 0.3] × 3.9 [± 0.1] µm, Qmm = 5.3 [± 0.1]). Yet, the ranges of the basidiospores sizes are largely overlapping. Marasmius auranticapitatus J.S. Oliveira, sp. nov. is 0.2-1 % dissimilar to M. haematocephalus based on the nrITS and 0.6-1 % dissimilar on the nrLSU.However, M. auranticapitatus J.S. Oliveira, sp. nov. is closer and sister to M. rubicundus (Singer) J.S. Oliveira, stat. nov. (Figs4; 5). Based on the nrITS data, M. auranticapitatus J.S. Oliveira, sp. nov. is 0.7-1.7% dissimilar to M. rubicundus (Singer) J.S. Oliveira, stat. nov., 0.2-0.6 % dissimilar in the nrLSU, 4.7-5.2% dissimilar in the rpb 2 and 1.4-1.9 dissimilar in the ef 1 - α. Marasmius auranticapitatus J.S. Oliveira, sp. nov. differs from M. rubicundus (Singer) J.S. Oliveira, stat. nov. in the pale yellowish orange pileus (vs rose, pink or pale red) and longer basidiospores (xmm = 21.1 [± 0.7] × 3.8 [± 0.3] µm, Qmm = 5.7 [± 0.5] vs xmm = 18.9 [± 0.5] × 3.8 [± 0.1] µm, Qmm = 5 [± 0.2]). With a transitional/ intermediate pattern and possibly a hydrid, the exceptional spore sizes of JO226 (more compatible with M. rubicundus (Singer) J.S. Oliveira, stat. nov.) strengthens the plausibility of the most recent common ancestry between M. auranticapitatus J.S. Oliveira, sp. nov. and M. rubicundus (Singer) J.S. Oliveira, stat. nov., a bridge of intercompatibility and gene flow or an ancestry trace. QuotingTaylor et al. (2000): “Even when BSR (Biological Species Recognition) can be applied to fungi, there is evidence that the criterion of reproduction lumps together groups of fungi that are genetically isolated in nature, but that retain the ancestral character of interbreeding”. Marasmius auranticapitatus J.S. Oliveira, sp. nov. is similar to M. siccus in the pileus pigmentation. However, based on the holotype, M. siccus has smaller basidiospores 15.2- 20 × 3.2-4.6 µm (Desjardin 1989). Also, M. siccus s.l. has more robust basidiomata (Gilliam 1976; Noordeloos 1987; Antonín & Noordeloos 2010; Antonín et al. 2012;) and temperate distribution. In the phylogenetic trees (Fig. 1), M. auranticapitatus J.S. Oliveira, sp. nov. is close to M. haematocephalus (embedded in haemat_cp1) and distant from M. siccus. Marasmius auranticapitatus J.S. Oliveira, sp. nov. is part of the haemat_cp2a (Fig. 3), only fully resolved in Figure 5. Marasmius haematocephalus var. anomaloides Desjardin originally described from the Tennessee, United States, also has orange pileus but differs from M. auranticapitatus J.S. Oliveira, sp. nov. in having much shorter basidiospores (14.4-19.2 × 3.4-4.6µm) (Desjardin 1991). The new species is neighter similar to any of the varieties of M. haematocephalus in Singer (1976) nor to any of the heterotypic sysnonyms once listed under M. haematocephalus (Appendix).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.020

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0040.005

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.207
Teacher spread0.185 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Published2022
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