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Record W6958270366 · doi:10.6084/m9.figshare.22599064

Additional file 1 of Allele-specific quantitation of ATXN3 and HTT transcripts in polyQ disease models

2023· other· en· W6958270366 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueFigshare · 2023
Typeother
Languageen
FieldSocial Sciences
TopicVladimir Nabokov Literary Studies
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsPlasmidReal-time polymerase chain reactionMutationDigital polymerase chain reactionTranscriptome

Abstract

fetched live from OpenAlex

Additional file 1: Fig. S1. Analyses of ATXN3 and HTT assays specificity. Results from ddPCR assays performed on seven samples with predefined ratios of WT/MUT ATXN3 (A) and HTT (B-C) plasmids (I—100% WT and 0% MUT; II—90% WT and 10% MUT; III—75% WT and 25% MUT; IV—50% WT and 50% MUT; V—25% WT and 75% MUT; VI—10% WT and 90% MUT; VII—0% WT and 100% MUT) using ATXN3_SNP5 (A), HTT_SNP5 (B) and HTT_SNP7 assays (C). Mean/Precise values are indicated on WT/MUT bars ± poisson error.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.967
Threshold uncertainty score0.529

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.9670.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.086
GPT teacher head0.287
Teacher spread0.202 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it