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Virulence of <i>Pyrenophora teres</i> populations in western Canada

2016· article· en· W6958499509 on OpenAlexaboutno aff

Bibliographic record

VenueFigshare · 2016
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicWheat and Barley Genetics and Pathology
Canadian institutionsnot available
Fundersnot available
KeywordsVirulenceInoculationPathogenCultivarCluster (spacecraft)Plant disease resistance

Abstract

fetched live from OpenAlex

Net blotch, caused by Pyrenophora teres, is an economically important disease of barley. The pathogen has two morphologically similar but genetically distinct forms: P. teres f. teres (Ptt) and P. teres f. maculata (Ptm), which cause net form net blotch (NFNB) and spot form net blotch (SFNB), respectively. The virulence of a collection of 39 Ptt and 27 Ptm isolates collected from western Canada was evaluated by inoculating these isolates onto sets of barley differential hosts. One week following inoculation, the second and third leaves of each plant were rated for disease severity on scales of 1–10 (for Ptt) or 1–9 (for Ptm). Plants rated <5 and ≥5 were scored as resistant and susceptible to Ptt, respectively, while plants rated 1–3 and >3 were scored as resistant and susceptible to Ptm. The experiment was repeated. Cluster analysis revealed 16 and 13 distinct pathotype groups, respectively, among the 39 and 27 representative Ptt and Ptm isolates. The barley differentials CI 5791 and CI 9820 were resistant to all isolates of Ptt except one, whilst the differential CI 9214 was resistant to all isolates of Ptm except two. Therefore, the differential lines CI 5791 and CI 9820, for Ptt, and CI 9214, for Ptm, can still be considered as potentially useful sources of resistance for Canadian barley breeding programmes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.080
Threshold uncertainty score0.161

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0020.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.063
GPT teacher head0.238
Teacher spread0.175 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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