MétaCan
Menu
Back to cohort
Record W6959226512 · doi:10.1021/ac3032383.s001

Paper-Based Solid-Phase\nNucleic Acid Hybridization\nAssay Using Immobilized Quantum Dots as Donors in Fluorescence Resonance\nEnergy Transfer

2016· article· en· W6959226512 on OpenAlexaff

Bibliographic record

VenueFigshare · 2016
Typearticle
Languageen
FieldEngineering
TopicBiosensors and Analytical Detection
Canadian institutionsAmgen (Canada)
Fundersnot available
KeywordsNucleic acidPeptide nucleic acidOligonucleotideDetection limitFluorescenceFörster resonance energy transferNucleic acid thermodynamicsNucleic acid detection

Abstract

fetched live from OpenAlex

A paper-based solid-phase assay is presented for transduction\nof\nnucleic acid hybridization using immobilized quantum dots (QDs) as\ndonors in fluorescence resonance energy transfer (FRET). The surface\nof paper was modified with imidazole groups to immobilize QD–probe\noligonucleotide conjugates that were assembled in solution. Green-emitting\nQDs (gQDs) were FRET-paired with Cy3 acceptor. Hybridization of Cy3-labeled\noligonucleotide targets provided the proximity required for FRET-sensitized\nemission from Cy3, which served as an analytical signal. The assay\nexhibited rapid transduction of nucleic acid hybridization within\nminutes. Without any amplification steps, the limit of detection of\nthe assay was found to be 300 fmol with the upper limit of the dynamic\nrange at 5 pmol. The implementation of glutathione-coated QDs for\nthe development of nucleic acid hybridization assay integrated on\na paper-based platform exhibited excellent resistance to nonspecific\nadsorption of oligonucleotides and showed no reduction in the performance\nof the assay in the presence of large quantities of noncomplementary\nDNA. The selectivity of nucleic acid hybridization was demonstrated\nby single-nucleotide polymorphism (SNP) detection at a contrast ratio\nof 19 to 1. The reuse of paper over multiple cycles of hybridization\nand dehybridization was possible, with less than 20% reduction in\nthe performance of the assay in five cycles. This work provides an\nimportant framework for the development of paper-based solid-phase\nQD–FRET nucleic acid hybridization assays that make use of\na ratiometric approach for detection and analysis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.363
Threshold uncertainty score0.980

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0210.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.269
Teacher spread0.247 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

Explore more

Same venueFigshareSame topicBiosensors and Analytical DetectionFrench-language works237,207