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ADRD-related divergences in HC and DN subregions for mode 2 and the associated phenome-wide profile.

2022· other· en· W6960351694 on OpenAlexaboutno aff

Bibliographic record

VenueFigshare · 2022
Typeother
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Pathogens and Resistance
Canadian institutionsnot available
Fundersnot available
KeywordsPosterior cingulateDefault mode networkContext (archaeology)Hippocampal formationPrefrontal cortexTemporal lobeBrain mappingMiddle temporal gyrus

Abstract

fetched live from OpenAlex

<p>Shown here are ADRD-related subregion divergences for mode 2 for the HC (leftmost panel) and DN (central panel). We identified 10 HC hits, most of them located in the left hemisphere. The strongest HC divergences were observed for the presubiculum, hippocampal fissure, and CA2/3. We found corresponding DN hits in posterior midline structure (posterior cingulate cortex and restrosplenial cortex), the dorsomedial prefrontal cortex, and the posterior and temporal cortices. In males and females separately, we regressed <i>APOE</i> dosage on HC and DN co-variation patterns from mode 2. We then used these sex-specific models to predict <i>APOE</i> dosage based on inter-individual expressions of mode 2. The right panel displays the Miami plot for the correlations between <i>APOE</i> scores in the context of mode 2 and the portfolio of UKB phenotypes for males (upper half) and females (lower half). We found significant associations with the fluid intelligence battery that were unique to males. Data underlying this figure can be found at <a href="https://github.com/dblabs-mcgill-mila/HCDMNCOV_AD/tree/master/Miami_Plots" target="_blank">https://github.com/dblabs-mcgill-mila/HCDMNCOV_AD/tree/master/Miami_Plots</a> (DOI: <a href="https://doi.org/10.5281/zenodo.7126809" target="_blank">10.5281/zenodo.7126809</a>). ADRD, Alzheimer’s disease and related dementia; CA, cornu amonis; DG, granule cell layer of the dentate gyrus; dmPFC, dorsomedial prefrontal cortex; DN, default network; FDR, false discovery rate correction; HC, hippocampus; IPL, inferior parietal lobule; MTS, middle temporal sulcus; PrS, presubiculum; PCC, posterior cingulate cortex; RSC, retrosplenial cortex; STS, superior temporal sulcus.</p> <p>(TIFF)</p>

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: none
Teacher disagreement score0.521
Threshold uncertainty score0.904

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0970.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.204
Teacher spread0.184 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

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