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The presence of intraductal carcinoma of the prostate and adjacent usual invasive prostate cancer detected by Raman micro-spectroscopy.

2020· other· en· W6960472926 on OpenAlexaboutno aff

Bibliographic record

VenueFigshare · 2020
Typeother
Languageen
FieldAgricultural and Biological Sciences
TopicGenetics and Plant Breeding
Canadian institutionsnot available
Fundersnot available
KeywordsProstate cancerRaman spectroscopyProstateH&E stainHistologyCarcinoma

Abstract

fetched live from OpenAlex

<p>(A) Standard histology immunostaining for high molecular weight cytokeratins and p63 (basal cell markers in brown) and α-methylacyl-CoA racemase (cancer cell marker in red), followed by hematoxylin and eosin (H&E) counterstaining to identify intraductal carcinoma of the prostate (IDC-P) along with adjacent cancer and prostate cancer without IDC-P. An adjacent 4-μm tissue section on an aluminum slide was used to target a precise location for Raman micro-spectroscopy (RμS) on unstained prostate tissue. (B) Average Raman spectra of IDC-P with adjacent cancer (15 patients; 112 spectra) and prostate cancer (272 patients; 1,088 spectra) from the Centre hospitalier de l’Université de Montréal (CHUM) cohort. Raman peaks (i.e., biochemical constituents of tissue) that were dominant contributors to the classification are identified with dotted gray lines. Bottom frame shows the standardized Raman spectra, where each individual feature has 0 mean and unit variance. Spectra with their respective variance are shown in <a href="http://www.plosmedicine.org/article/info:doi/10.1371/journal.pmed.1003281#pmed.1003281.s006" target="_blank">S6B Fig</a>.</p>

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.620
Threshold uncertainty score0.995

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0060.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.199
Teacher spread0.181 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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