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Record W6968228337 · doi:10.5281/zenodo.4396980

Oaphantes pallidulus

2020· article· en· W6968228337 on OpenAlexaff

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSpider Taxonomy and Behavior Studies
Canadian institutionsWorld Water and Climate Foundation
Fundersnot available
KeywordsHolotypeCaveGeorge (robot)ShoreLedger

Abstract

fetched live from OpenAlex

Oaphantes pallidulus (Banks, 1904) (Figs 1–8, 25) Bahyphantes pallidula Banks, 1904 b: 346, fig. 45 (Description of male). Oaphantes pallidulus Chamberlin & Ivie, 1943: 7, fig. 10–11. (Transferred male from Bathyphantes, described female), Briggs & Ubick, 1988: 44, Buckle et al., 2001: 243, Ubick, 2001: 10, Paquin et al., 2009a: 51–53, Elliott et al., 2017: 181. Type material.— Bathyphantes pallidula Banks, EXAMINED. Holotype male. Label 1: “ Bathyphantes pallidula Banks type. Claremont [W 117˚, N 36˚], Los Angeles CA, U.S.A. Baker (Nathan Banks Coll.) MCZ 22485”. Label 2: “(Nathan Banks Coll.)”. There is some ambiguity about the type depository, which Chamberlin & Ivie (1943: 8) give as CAS. Banks (1904: 232) stated that the holotypes of the 38 new species will be divided between the two institutions but did not indicate which species go where. Other material.— USA: California: San Mateo Co.: San Bruno Mountain, N slope nr Guadaloupe Industrial Park, 11.xii.1998, coastal scrub with chaparral, under sandstone (graywacke) rock, 1♂, D. Ubick & T. Briggs (CDU); Santa Clara Co.: Stanford [sic, coordinates and original paper mention Santa Cruz, see remark] 122.37 nw., 19.xii.1928, 1♂, J.C. Chamberlin (AMNH); Santa Cruz Co., Dolloff Cave, Cave Gulch, 28.viii.1963, hand collect- ing, 2♀, R.E. Graham (AMNH); same, 7.v.1988, 1♀, D. Ubick, T. Briggs, W. Savary & W. Rauscher (CDU); IXL Cave, 28.viii.1963, under wood on floor, hand collecting, 1♂ 3♀, R.E. Graham (AMNH); Santa Cruz City Cave, 31.i.1960, under wood on floor, hand collecting, 2♀, R.E. Graham (AMNH); Stump Cave, Cave Gulch, 27.vii.2001, hand collecting, 1♀, D. Ubick, T. Briggs (CDU); same, 22.i.2005, in cave along walls in webs, hand collecting, 2♂ 2♀, P. Paquin & D. Ubick (CPAD); same, 26.vii.2010, 1♀, J.M. Ledford (CDU); Monterey Co., Pacific Grove, [121°N, 36°W on label] [36°37’N, 121°54’W] 15.viii.1931, 1♂, W. Ivie (AMNH); San Benito Co., 1400 Hwy 101, Monterey Vacation RV Park, below Pinacate Peak, north-facing oak hillside south of park, [36.86023 - 121.61266] 11.iii.2006, 1 ♀, 90m altitude, under boulders, M. Hedin et al. (CPAD). Diagnosis.— Males and females of O. pallidulus most resemble those of O. prometheus n. sp. in genitalic structures (male palp with large terminal apophysis (TA) and female with long scape (SC)) (compare Figs 3, 6 with 19, 22) but differ by their larger size and the presence of eyes (Fig. 2). Additionally, males are distinguished by a larger paracymbium bearing a longitudinal keel curving apically (Fig. 3) and an embolus (E) harbouring a spike on basal half (Fig. 4). Females are distinguished by their dome-shaped anterior epigynal margin (Fig. 6), a long scape (SC) slightly enlarging at tip that nearly reaching the tip of the abdomen (Figs 6, 8). Males are distinguished from O. cryophilus n. sp. by their large terminal apophysis (Figs 3, 4), absent in the latter species (Figs 11, 12); females are distinguished by their curved secondary spermathecae (Fig. 15), straight in O. pallidulus (Fig. 7). Description.— Male (n=5): Total length: 2.17–2.77; carapace length: 1.09–1.36; carapace width: 0.82–1.02; carapace smooth, shiny, light yellow orange (130M), slightly raised in cephalic region, bearing 2–4 erect setae along midline. Sternum light yellow orange (130M). Chelicerae light orange (137M), promargin carinated with 4 teeth and a mastidion (Fig. 2), retromargin with 4 denticles, presence of setae-tipped tubercles on cheliceral surface. Cheliceral stridulatory organ visible with ∼ 20 striae. Endites light yellow orange (130M) with a single setose tubercle (Fig. 1). Abdomen off-white (7500M), sub-cylindrical, pointed apically, covered with long semi-erect setae; ventral surface of abdomen with oval striated epigastric plates. Legs long and slender, light yellow orange (130M), formula 1-4-2-3; tibia I–IV with 2 long dorsal macrosetae; metatarsus I with dorsal trichobothrium, Tm I 0.28, Tm IV absent; coxae IV with stridulatory pick. Palpal femur with stridulatory pick. Male palp: paracymbium complex (P) with a longitudinal keel curving apically, a proximal pocket (PPO), a proximal protuberance bearing three long setae, and one short seta on its apical part (Fig. 3); embolus (E) long, smooth, bearing a spike on basal half, curving and extending beyond the cymbium (Figs 4, 5); embolic membrane (EM) large and long (Figs 4, 5); terminal apophysis (TA) basally well sclerotized with an embossed surface, apical part membranous and acuminate (Figs 4, 5); lamella characteristica (LC) slender and twisted (Figs 4, 5); 1 tooth on distal suprategular apophysis (SA) (Figs 4, 5); retrolateral tibial apophysis (RTA) present (Fig. 3). Female (n=5): Total length: 2.53–3.15; carapace length: 1.16–1.33; carapace width: 0.87–0.97; carapace colouration as in male, not elevated in cephalic region, bearing 4–5 erect setae along midline. Colouration of sternum and chelicerae as in male, promargin of chelicerae with 4 large teeth and 1 medium sized tooth, retromargin with four denticles, presence of setae-tipped tubercles on cheliceral surface. Cheliceral stridulatory organ visible with ∼ 15 striae. Endite colouration as in male, without setose tubercle. Abdomen colouration as in male, sub-cylindrical, pointed apically, covered with long semi-erect setae; ventral surface of abdomen bearing oval striated epigastric plates. Legs long and slender, light yellow orange (130M), formula 1-4-2-3; tibia I–IV with 2 long dorsal macrosetae; metatarsus I with dorsal trichobothrium, Tm I 0.24–0.27, Tm IV absent; coxae IV with stridulatory pick. Palpal femur with stridulatory pick. Epigynum characterized by the broad, dome-shaped anterior margin of scape (Fig. 6), gradually narrowing in a long scape (SC), slightly enlarging apically and almost reaching the apex of the abdomen (Fig. 8); spermathecae (S) oval, secondary spermathecae (SS) elongate, straight and directed posteriorly (Fig. 7); copulatory openings (CO) located on the underside of scape near the apex, associated with terminal pockets (TP) (Fig. 7); copulatory ducts (CD) long (Fig. 7); fertilization ducts (FD) short and sinuous (Fig. 7). Distribution.— Coastal California from San Mateo to Los Angeles Counties. Habitat.— Troglophilic species with several cave records but also known from coastal scrub under stones and boulders. Etymology.— The Latin translation of pallidulus means somewhat pale. Remarks.— There is some confusion about the male specimen collected by J. C. Chamberlin in Santa Clara County. The locality information found on the label is different than the information found in the original paper by Chamberlin & Ivie (1943). The label mentions “Stanford, 122.37 nw.” whereas in the published paper, “Santa Cruz (W 122°: N 37°)” is written. Since the published paper and the coordinates point to Santa Cruz, we assume that a mistake occurred on the label.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.591
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.054
GPT teacher head0.252
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Published2020
Admission routes1
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