Fig. 4 in A new ape from Türkiye and the radiation of late Miocene hominines
Bibliographic record
Abstract
Fig. 4 Strict consensus cladograms. The four taxon sets each produced cladograms with the same topology whether character states were left unordered or a subset were ordered (see Methods and Supplementary Note 5 for details). a 18 OTUs. The four taxa with the fewest codable character states (Graecopithecus, 10%, Chororapithecus,13%, Samburupithecus, 18%, and Orrorin, 29%) were excluded, as was Sahelanthropus. Both Orrorin and Sahelanthropus were coded from published descriptions, which introduces uncertainty (DRB, who coded all characters in this analysis, was unable to code characters from these taxa through direct observation). b 19 OTUs, with Sahelanthropus added. c 20 OTUs with Orrorin. There is a decrease in resolution with the inclusion of Sahelanthropus and Orrorin but the tree topologies are otherwise consistent. Sahelantthropus is always recovered as a stem hominid and Orrorin as a hominin. The first three cladograms all recover a hominine clade that includes the thickly enameled Balkan taxa and the dryopithecins. d 23 OTUs, including all taxa. Little resolution remains among hominids, with recognized clades (pongines) unresolved. This cladogram also fails to recover Ouranopithecus as a hominine, which is otherwise a common result in previous analyses. Bremer support values, character states, character definitions and the character matrix (nexus) are all included in Supplementary Note 5 and Supplementary Data 3.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.001 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.002 | 0.002 |
| Science and technology studies | 0.003 | 0.001 |
| Scholarly communication | 0.001 | 0.001 |
| Open science | 0.000 | 0.001 |
| Research integrity | 0.001 | 0.001 |
| Insufficient payload (model declined to judge) | 0.027 | 0.003 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".