Additional file 2 of Mucin O-glycan-microbiota axis orchestrates gut homeostasis in a diarrheal pig model
Bibliographic record
Abstract
Additional file 2: Figure S2. Bacteria-derived metabolites levels in piglets. The concentrations of (A) total SCFAs, (B) acetate, (C) propionate, (D) isobutyrate, (E) butyrate, (F) isovalerate, (G) valerate, (H) lactate. The composition of each BA in the (I) colonic contents and (J) feces of piglets. The concentrations of (K) PBA, (L) SBA, (M) TCBA, and (N) GCBA. Data are presented as min to max showing all points. H: Healthy controls; D: Diarrheal piglets; SCFAs: Short chain fatty acids; BA: Bile acid; PBA: Primary bile acids; SBA: Secondary bile acids; TCBA: Taurine-conjugated bile acids; GCBA: Glycine-conjugated bile acids; TCA: Taurocholic acid; TCDCA: Taurochenodeoxycholic acid; GCA: Glycocholic acid; GCDCA: Glycochenodeoxycholic acid; TLCA: Taurolithocholic acid; TUCDA: Tauroursodeoxycholic acid; GDCA: Glycodeoxycholic acid; GUDCA: Glycoursodeoxycholic acid; THDCA: Taurohyodeoxycholic acid; TDCA: Taurodeoxycholic acid; UDCA: Ursodeoxycholic acid.
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.002 | 0.013 |
| Meta-epidemiology (narrow) | 0.001 | 0.001 |
| Meta-epidemiology (broad) | 0.002 | 0.001 |
| Bibliometrics | 0.002 | 0.003 |
| Science and technology studies | 0.001 | 0.000 |
| Scholarly communication | 0.002 | 0.001 |
| Open science | 0.002 | 0.001 |
| Research integrity | 0.002 | 0.001 |
| Insufficient payload (model declined to judge) | 0.805 | 0.083 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".