Additional file 12 of Elucidating the role of the gut microbiota in the physiological effects of dietary fiber
Why this work is in the frame
A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.
Bibliographic record
Abstract
Additional file 12: Figure S5. Associations between the effects on perceived satiety and surrogate endpoints and the dominant fecal microbiota features affected by fiber supplementation. Heatmap shows cubed-root transformed β-coefficients of univariate generalized linear models performed on the compositional (dominant AX-responsive taxa at baseline, shifts, and ex vivo) and functional (fecal propionate and bile acid shifts) features of the gut microbiota. Statistical significance was considered at FDR corrected q values < 0.05. ∆, absolute change from baseline to week 6; %∆, percent change from baseline to week 6; 7αOHCA; 7αOH-3-oxo-4-cholestenoic acid; ApoCA; apocholic acid; ASV, amplicon sequence variant; AUC, area under the curve; AX, arabinoxylan; BL, baseline; HDCA, hyodeoxycholic acid; HOMA-IR, homeostatic model assessment of insulin resistance; MCC, microcrystalline cellulose; OTU, operational taxonomic unit; TNF-α, tumor necrosis factor-α.
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.001 | 0.001 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.191 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it