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Record W6979857784

AMPK-dependent regulation of foraging behaviours in Caenorhabditis elegans

2017· dissertation· en· W6979857784 on OpenAlexafffund

Bibliographic record

VenueeScholarship@McGill (McGill) · 2017
Typedissertation
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetics, Aging, and Longevity in Model Organisms
Canadian institutionsMcGill University
FundersCanadian Institutes of Health Research
KeywordsAMPKCaenorhabditis elegansProtein kinase AGlutamate receptorEnergy homeostasisOptogeneticsRegulatorZebrafishMetabotropic glutamate receptor
DOInot available

Abstract

fetched live from OpenAlex

Energy homeostasis is of paramount importance for metabolic health and survival during energy stress and this must occur at both the cellular and organismal level.Starvation is therefore often accompanied by compensatory behaviours that are believed to increase the probability of encountering a food source.But how hunger results in changes in the neural activity to trigger specific adaptive behavioural responses has yet to be elucidated.AMP-activated protein kinase (AMPK) is a key metabolic sensor that acts as a regulator of adaptive behavioural responses during acute starvation, although the mechanisms by which this kinase affects such outcomes remain unclear.We observed that the starved AMPK-deficient C. elegans larvae display a locomotory defect that reveals their inability to appropriately respond to resource depletion.We observed that reconstitution of AMPK in the AIB and AIY interneurons that are involved in the various locomotory responses associated with reduced food availability completely rescues the locomotory defects of AMPK mutants.Using a combination of classic genetic analysis, optogenetic approaches and calcium imaging techniques, we found that although AMPK is not involved in essential aspects of neural function, it does play a key role in the modulation of neuronal activity upon starvation which in turn ensures adaptive behavioural outcomes in response to acute starvation.Furthermore, we discovered that AMPK mediates this effect by regulating the levels of AMPA-type glutamate receptor GLR-1 and Metabotropic glutamate receptor MGL-1 in the AIB and AIY interneurons respectively, which ultimately modulates synaptic strength under conditions of starvation.Overall, our study suggests that besides its well-known function in metabolic control at the cellular level, AMPK also acts as a molecular trigger and funding which profoundly made my Ph.D. experience productive and stimulating.The joy and enthusiasm he has for science was contagious and motivational for me, even during tough times.Next, I would like to thank our lab manager Shaolin Li, who always was available to solve the technical issues and provided many useful suggestions to my projects.I would like to specially thank Dr. Michael Hendricks for the substantial influence his support and continuous help have had on my Ph.D.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.245
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes2
Has abstractyes

Explore more

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