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Record W6979979886

Application of Environmental Metabolomics for Assessment of Aquatic Invertebrate Sensitivity to Naphthenic Acids

2023· dissertation· en· W6979979886 on OpenAlexaffabout

Bibliographic record

VenueUWSpace (University of Waterloo) · 2023
Typedissertation
Languageen
FieldChemistry
TopicPetroleum Processing and Analysis
Canadian institutionsUniversity of Waterloo
Fundersnot available
KeywordsMetabolomeMetabolomicsNaphthenic acidMetaboliteAquatic toxicologyToxicityInvertebrateAcute toxicity
DOInot available

Abstract

fetched live from OpenAlex

Naphthenic acids (NAs) are a class of chemicals found in oil sands process waters (OSPW) from the extraction of bitumen from surface mined oil sand. In Alberta, Canada, OSPW is currently stored indefinitely in tailing ponds and there are environmental concerns about seepage or spillage. NAs are known to be toxic to aquatic organisms. However, NA toxicity data are limited to primarily acute effects in a few species. Due to difficulties in comparing NA toxicity results, an extracted solution referred to as naphthenic acid fraction components (NAFCs) can be used as it is representative of OSPW toxicity and is well characterized. The goal of this research is to inform NA standards by performing chronic toxicity tests to derive metabolomic responses and estimates of survival. I exposed the ramshorn snail (Planorbarius corneus), and nymphs of two dragonflies, the common whitetail (Plathemis lydia) and the eastern pondhawk (Erythemis spp.), to 0, 6, 12, and 25 mg/L NAFCs for 21-days (snails) or 14-days (dragonflies) in laboratory microcosm experiments. Survival was altered only in the common whitetail with NAFC exposure. Snails laid approximately double the number of egg masses at higher concentrations of NAFCs. The metabolome responded differently among taxa. NAFC exposure altered the metabolome of only the common whitetail. Metabolite analysis for the common whitetail found that most altered metabolites were amino acids. The identified metabolites were involved primarily in pathways related to energy metabolism and protection from oxidative stress. My findings indicate that sensitivity to NAFCs is taxon-specific and demonstrate that an organism’s metabolome can provide insight into toxic effects of NAFCs.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.228
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes2
Has abstractyes

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