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Record W6981061064

Development of a biosensing strategy for multiplex and dynamic quantification of a secretory fingerprint from human pancreatic islets

2019· dissertation· en· W6981061064 on OpenAlexfundno aff

Bibliographic record

VenueeScholarship@McGill (McGill) · 2019
Typedissertation
Languageen
FieldNeuroscience
TopicNeurobiology of Language and Bilingualism
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsMultiplexPancreatic isletsPancreasHormoneBiosensorDiabetes mellitusDiabetic nephropathyInsulin
DOInot available

Abstract

fetched live from OpenAlex

Diabetes mellitus is a chronic disorder occurring when elevated levels of blood glucose, known as hyperglycemia, result from the body's impaired ability to produce or regulate insulin. If left untreated, chronic hyperglycemia can cause cardiovascular disease, neuropathy, nephropathy and eye disease, leading to retinopathy and blindness. In 2017 the number of people with diabetes reached 425 million worldwide. This disease arises from deficiencies in the secretory pathways of the pancreatic islets, a micro-organ constituting 1-2% of the pancreas mass. Recent studies have shown that the cells comprising the islets possess an intricate communication system, in which their secreted hormones exert paracrine interactions on neighbor cells. However, little is understood about the consequences of such communications. Up-to-date most research in the field has focused on understanding the processes related with insulin and glucagon secretion, the main hormones secreted by the two major cell types present in the islets. Thus, monitoring a secretory fingerprint (SF) contemplating more than two hormones, presents a research opportunity to increase our current understanding of diabetes. Due to their simplicity, ease of use, non-invasive and label-free nature, biosensors provide an excellent basis for the development of analytical tools capable of detecting the SF of islets. Therefore, the main objective of the present thesis was to develop a biosensing strategy for the multiplex detection of a SF composed of the hormones secreted by the three major cell types contained in the pancreatic islets. At first, we explored the use of a capacitance-based biosensor for the detection of insulin. This biosensing technique was selected, since it could offer high sensitivity, potential for multiplexing and capabilities for integration with microelectronic technologies. Since the performance of this biosensor critically depends on the surface chemistry design of the bioreceptor immobilization, a systematic study was performed to evaluate the effect of common architectures reported in literature. These chemistries included the covalent immobilization of biomolecules on the electrodes, in the gaps between electrodes and a conformal coating covering both. The development of this capacitive biosensor provided valuable knowledge on the effect of various parameters for the detection of insulin, however its implementation for islet continuous SF analysis proved difficult due to its long analysis time. Thus, we explored surface plasmon resonance imaging (SPRi) as an alternative to fully reach the thesis objective. By combining a competitive immunoassay with SPRi and the optimization of the sensor's surface chemistry it was possible to detect, for the first time, insulin, glucagon and somatostatin simultaneously. This biosensing strategy presented a limit of detection (LOD) comparable to previous reports detecting insulin and glucagon secretions individually with a short analysis time. However, detecting the smallest hormone, somatostatin, remained a challenge due to the obtained high LOD compared to insulin and glucagon and a lack of reports providing a desirable reference for its performance. Thus, to address this pitfall and ensure the detection of all targeted hormones in a biologically relevant concentration range, we performed a study comparing three different signal amplification strategies based on gold nanoparticles (GNPs). These strategies included GNPs immobilized on the sensor surface, GNPs conjugated with primary antibodies and GNPs conjugated with a secondary antibody for post competitive assay amplification. Here, multiplexed detection of the three hormones was achieved with an improved LOD of 9 fold for insulin, 10 fold for glucagon and 200 fold for somatostatin when compared to the SPRi biosensor without GNPs signal amplification, successfully addressing the aforementioned challenge.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.050
GPT teacher head0.304
Teacher spread0.254 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

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