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Record W6987850182

Upregulated Th2/treg brain gene expression in pups of nematode-infected mice associated with enhanced expression of leukocyte trans-endothelial cell migration across the blood brain barrier

2021· dissertation· en· W6987850182 on OpenAlexfundno aff

Bibliographic record

VenueeScholarship@McGill (McGill) · 2021
Typedissertation
Languageen
FieldNeuroscience
TopicBarrier Structure and Function Studies
Canadian institutionsnot available
FundersFonds de recherche du Québec – Nature et technologiesNatural Sciences and Engineering Research Council of CanadaMcGill University
KeywordsDownregulation and upregulationKEGGGene expressionSignal transductionRegulation of gene expressionImmune systemTranscriptomeBlood–brain barrier
DOInot available

Abstract

fetched live from OpenAlex

A maternal murine infection with an intestinal nematode parasite that induces a Th2/Treg response during pregnancy and lactation was previously reported to alter expression of over 5500 genes in the brain of their 7-day old male pups.To explore evidence that immunerelated elements of the pup brain and transport of immune signals across the blood-brain barrier were altered, we mined the gene expression database for genes in relevant KEGG pathways regardless of whether or not the pathway itself was differentially regulated by maternal infection.Although the Th1/Th2 cell differentiation KEGG pathway was not differentially expressed in response to maternal infection, brain gene expression of the Th2 response cascade and its product, IL-4 was upregulated.Consistent with this, expression of several Th1 cytokines including IL-1, as well as receptors and their related proteins were downregulated.Evidence of upregulation of the Treg response included upregulation of TGF family genes.The endocytosis pathway that transmits receptor-mediated cytokine and immunoglobulin signals to the pup brain was upregulated in neonates of nematode-infected dams, but genes associated with endosome formation component were downregulated suggesting impaired vesicle-mediated transport into the pup brain.The leukocyte transendothelial migration KEGG pathway was also upregulated, as was expression of integrin genes which mediate leukocyte attachment and paracellular diapedesis.This indicated that maternal infection may promote movement of leukocytes across the neonatal blood-brain barrier.Thus, we hypothesize that maternal infection may promote a Th2/Treg environment in the pup brain through migration of Th2/Treg cells across the blood brain barrier.Our study is the first to report the impact of a maternal H. bakeri infection on expression of immune related genes in the pup brain.E. Scott for welcoming me into her lab with continuous support.I am also thankful for my committee members Dr.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.002
Science and technology studies0.0010.000
Scholarly communication0.0000.001
Open science0.0010.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.238
Teacher spread0.227 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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