MétaCan
Menu
Back to cohort
Record W6991230068

Functional characterization of stomatin-like protein 2

2017· dissertation· en· W6991230068 on OpenAlexafffund

Bibliographic record

VenueeScholarship@McGill (McGill) · 2017
Typedissertation
Languageen
FieldMedicine
TopicErythrocyte Function and Pathophysiology
Canadian institutionsMcGill University
FundersCanadian Institutes of Health ResearchMcGill University
KeywordsCardiolipinMitochondrionCompartmentalization (fire protection)Respiratory chainInner mitochondrial membraneProhibitinImmunoprecipitationTranslocase
DOInot available

Abstract

fetched live from OpenAlex

Stomatin-like protein (SLP)-2 is a widely expressed and highly conserved protein identified in a proteome analysis of detergent-insoluble, glycolipid-enriched microdomains of human T cells activated through the antigen receptor.SLP-2 partitions mostly in mitochondria but a low abundance pool is present at the plasma membrane.SLP-2 is upregulated upon T cell activation, and its deletion in T cell-specific SLP-2 knockout mice results in a post-transcriptional defect in IL-2 production and decreased T cell responses.Mechanistically, SLP-2 binds the mitochondrial phospholipid cardiolipin and interacts with prohibitin (PHB) proteins, correlating with impaired cardiolipin compartmentalization and respiratory function in SLP-2-deficient T cells.In our current model of SLP-2 function, SLP-2 recruits PHBs to cardiolipin to form cardiolipinenriched microdomains in the mitochondrial inner membrane.We hypothesize that these specialized microdomains may provide an environment necessary for the optimal assembly and function of multichain complexes, including respiratory supercomplexes and translation machinery.Respiratory chain complexes naturally associate to form supercomplexes for optimal electron transfer and function, and cardiolipin is known to be important in this process.We found that in the absence of SLP-2, T cells exhibited defective assembly of complex I-III 2 and I-III 2 -IV 1-3 supercomplexes but not of individual respiratory complexes.This correlated with increased respiration uncoupled from ATP production, a greater reliance on glycolysis, and significantly delayed T cell proliferation when glycolysis was inhibited, together demonstrating the importance of SLP-2 in mitochondrial respiratory function.Mitochondrial translation occurs in close proximity to the mitochondrial inner membrane and is essential for generating core polypeptides of respiratory chain complexes.Given the Table of Contents

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.177
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.254
Teacher spread0.231 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes2
Has abstractyes

Explore more

Same venueeScholarship@McGill (McGill)Same topicErythrocyte Function and PathophysiologyFrench-language works237,207