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Record W6991996061

Investigating the role of experimental introgression in Poplar stress tolerance

2024· article· en· W6991996061 on OpenAlexaboutno aff

Bibliographic record

VenueScholarWorks -A service of University of Vermont Libraries (University of Vermont) · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic Mapping and Diversity in Plants and Animals
Canadian institutionsnot available
Fundersnot available
KeywordsIntrogressionPopulus trichocarpaHybridOffspringSalicaceaeGenetic admixtureGene poolGene flow
DOInot available

Abstract

fetched live from OpenAlex

Introgression is known from many natural populations of plants for its potential for fitness effects in response to changing environments. Genomic footprints of admixture exist in Populus trichocarpa with its sister species, Populus balsamifera due to its natural hybrid zones in Alaska, northwestern Canada, and the Canadian Rockies. The relationship between admixture and phenotypic variations was investigated with experimental crosses between related species of Populus to determine whether the admixed offspring demonstrates hybrid vigor and increased stress-resistance. Additionally, the presence of candidate genes and loci was investigated for adaptive introgression, where a region associated with the trait of interest is heterozygous for P. trichocarpa and P. balsamifera alleles. Experimental offspring were generated by crossing male genotypes containing various ancestry fractions of these two species (from 0% P. balsamifera up to 7% P. balsamifera) with female genotypes of other species used in poplar breeding programs. The resulting offspring were then subjected to a factorial stress experiment of heat and drought in controlled growth chambers. The results demonstrated that a combination of these stressors significantly affected stomatal conductance in offspring from both admixed and non-admixed ancestries. Local ancestry inferences revealed the presence of genomic regions in the parent species associated with stomatal conductance and stomatal density. The study provides insights into the genetic basis of stress resilience in admixed plant populations which could be crucial to understand for conservation and management efforts in the face of climate change.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.186
Teacher spread0.179 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

Explore more

Same venueScholarWorks -A service of University of Vermont Libraries (University of Vermont)Same topicGenetic Mapping and Diversity in Plants and AnimalsFrench-language works237,207