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Record W7005876746

SEROLOGICAL AND MOLECULAR EVALUATION OF TISSUE-DWELLING PARASITES (SARCOCYSTIDAE) IN HARVESTED WILDLIFE IN THE CANADIAN ARCTIC

2024· dissertation· en· W7005876746 on OpenAlexfundaboutno aff

Bibliographic record

VenueUniversity Library (University of Saskatchewan) · 2024
Typedissertation
Languageen
FieldImmunology and Microbiology
TopicToxoplasma gondii Research Studies
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of CanadaConsejo Nacional de Ciencia y TecnologíaChurchill Northern Studies CentreEnvironment and Climate Change CanadaCanadian Wildlife FederationWorld Wildlife FundParks CanadaArcticNetQuark Expeditions
KeywordsToxoplasma gondiiSeroprevalenceWildlifeSarcocystisBeluga WhaleTransmission (telecommunications)ZoonosisSerologyPolymerase chain reaction
DOInot available

Abstract

fetched live from OpenAlex

Country foods are integral to Inuit cultural identity and food security. However, the harvest and consumption of wildlife pose risks of transmission of zoonotic parasites, such as Toxoplasma gondii, of concern for Inuit communities in the Canadian Arctic. The main aim of this thesis was to determine seroprevalence and tissue prevalence of Toxoplasma gondii and related tissue-dwelling coccidian parasites in harvested wildlife in the Canadian Arctic. To address these objectives, I used multiple serological techniques to detect antibodies against parasites and molecular approaches to detect DNA in tissue samples. The overall seroprevalence for T. gondii in caribou from Nunavik, Québec was 18% (95% CI: 11.5-28%) and 1% (95% CI: 0.2-4.6%) in belugas from the Eastern Beaufort Sea, Northwest Territories. On magnetic capture DNA extraction and qPCR for T. gondii in heart and brain of caribou and belugas, DNA of T. gondii was detected in only one beluga heart. This suggests that the risk of zoonotic transmission of T. gondii from harvesting and consuming caribou and belugas is low, but not zero. Antibodies to Neospora caninum were detected in 5% (95% CI: 0.6-8%) and DNA was detected in tissues of 1.5% (95% CI: 0.3-7.9%) of caribou harvested in Nunavik. Furthermore, DNA of Sarcocystis spp. was detected in both heart and skeletal muscle from caribou (85%, 95% CI: 76.4-91.2%), and muscle of beluga (59%, 95% CI: 47.9-69.2%). Phylogenetic analysis of Sarcocystis spp. from caribou were linked to terrestrial canids, and were similar to sequences reported in Europe, possibly reflecting translocations of Rangifer sp. In contrast, Sarcocystis sp. from belugas indicated a potential marine life cycle. Finally, I compared in-house ELISAs with a commercial ELISA kit in previously tested polar bear samples for T. gondii to optimize these tests in wildlife, emphasizing the need for improved testing protocols, known controls, and statistical approaches to test comparison when gold standards are lacking. In conclusion, this thesis contributes to our understanding of tissue-dwelling coccidian parasites in wildlife harvested for human consumption, offers insights into arctic trophic dynamics, and highlights the importance of a One Health concept for human and animal health in the Canadian North.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.060
Threshold uncertainty score0.121

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.002
Science and technology studies0.0020.001
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.226
Teacher spread0.212 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes2
Has abstractyes

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