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Record W7006565714

Vascular plaque detection from optical coherence tomography images

2021· dissertation· en· W7006565714 on OpenAlexfundaboutno aff

Bibliographic record

VenueMspace (University of Manitoba) · 2021
Typedissertation
Languageen
FieldMedicine
TopicCoronary Interventions and Diagnostics
Canadian institutionsnot available
FundersNational Research Council Canada
KeywordsMarkov random fieldOptical coherence tomographyPattern recognition (psychology)Cluster analysisSegmentationImage segmentationFuzzy clusteringPrincipal component analysis
DOInot available

Abstract

fetched live from OpenAlex

It is difficult to detect atherosclerotic plaque from optical coherence tomography (OCT) images via visual inspection. In this work, we developed three algorithms to allow us to detect atherosclerotic plaque more effectively: (i) a statistical method that uses higher-order moments; (ii) a model-based method that enables vascular plaque to be automatically identified based on the textural features in OCT images; (iii) and a sparsity-based segmentation algorithm in the curvelet domain. All three algorithms do not rely on visual inspection at all. The statistical method consists of three main components: extracting statistical image textural features using the Spatial Gray Level Dependence Matrix (SGLDM) method; applying an unsupervised Fuzzy C-means clustering algorithm to these features; and, finally, mapping specific clustered regions—namely, background, plaque, vascular tissue, and the deep-depth degraded signal in feature-space—back to the actual image. Since the use of the full set of 26 textural features is computationally expensive and may not be practical for real-time implementation, we identified a reduced set of 6 textural features, which were used to characterize vascular plaque via sparse principal component analysis. However, our clustering-based algorithm results had some limitations, most notably non-smooth and coarse segmentation results. To overcome this low spatial resolution limitation, we developed a stochastic model to segment OCT images of vascular tissue into plaque and non-plaque (i.e., healthy tissue) regions, as well as background regions. Our stochastic model is based on a maximum a posteriori-Markov Random Field (MRF-MAP) framework wherein OCT images of vascular tissue were modeled as a Markov random field. This MRF-MAP-based algorithm yielded results with better spatial resolution, but it is not consistent and also computationally expensive, thereby impractical for real-time implementation. Our third approach, using a sparsity-based segmentation algorithm in the curvelet domain, overcame the two limitations above by generating both fast and high-resolution vascular plaque detection from OCT images. We verified the validity of the results of all three methods using both qualitative and quantitative methods. Specifically, all results were compared with 1) actual photographic images of vascular tissue samples, 2) histology results, and 3) ground truth obtained from manual segmentations performed by four cardiovascular surgeons from the Intervention Cardiology Group at St. Boniface Hospital, Winnipeg, Manitoba. These comparisons of results demonstrated that our three methods allow good plaque detection, thus making them potential clinical tools for the detection of vascular plaque from OCT images and for clinical studies involving OCT imaging of vascular plaque. .

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.219
Teacher spread0.209 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes2
Has abstractyes

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