MétaCan
Menu
Back to cohort
Record W7008314751

Biochemical and genetic approaches to understanding the functions of the protein tyrosine phosphatase-sigma

2003· dissertation· en· W7008314751 on OpenAlexaboutno aff

Bibliographic record

VenueeScholarship@McGill (McGill) · 2003
Typedissertation
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicProtein Tyrosine Phosphatases
Canadian institutionsnot available
Fundersnot available
KeywordsReproductionInheritance (genetic algorithm)Biological evolutionTyrosine
DOInot available

Abstract

fetched live from OpenAlex

PTP-sigma, a developmentally regulated receptor protein tyrosine phosphatase of the LAR family, is highly expressed in the nervous system and is involved in axon guidance. In this study, two potential substrates of PTP-sigma have been detected by substrate trapping and two-dimensional electrophoresis. In addition, an expression pattern of PTP-sigma in adult non-neural mouse tissues has been established and opens new research avenues for the function of PTP-sigma. The high levels of PTP-sigma in fat led us to look into a possible role for this enzyme in insulin signaling. Insulin stimulated PTP-sigma knockout adipose tissue showed an hyperphosphorylation of the insulin receptor (IR). GH-deficiency is predominantly responsible for glucose homeostasis defects of PTP-sigma knockout mice and could mask the effect of the absence of PTP-sigma in insulin signaling in vivo. To overcome this, adipocytes were isolated. Upon insulin stimulation of PTP-sigma knockout adipocytes, an increase in IR and a decrease in Akt phosphorylation were observed, suggesting that the IR could be a substrate of PTP-sigma and that PTP-sigma could be involved in the regulation of the activation of Akt. The elucidation of the mechanisms of action of PTP-sigma in insulin signaling may lead to the development of new treatments in diabetes and obesity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.012
Threshold uncertainty score0.025

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0000.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0050.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.040
GPT teacher head0.227
Teacher spread0.187 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2003
Admission routes1
Has abstractyes

Explore more

Same venueeScholarship@McGill (McGill)Same topicProtein Tyrosine PhosphatasesFrench-language works237,207