MétaCan
Menu
← Back to cohort
Record W7014523043

The production of 4-adminobutyrate in response to treatments reducing cytosolic pH and the regulation of intracellular pH

2009· other· en· W7014523043 on OpenAlexaff

Bibliographic record

VenueBrock University Digital Repository (Brock University) · 2009
Typeother
Languageen
Field
Topic
Canadian institutionsBrock University
Fundersnot available
KeywordsButyric acidAcetic acidCytosolSteady state (chemistry)Extracellular
DOInot available

Abstract

fetched live from OpenAlex

GABA (4-aminobutyrate) is synthesized through the decarboxylation of LGlu- \n(L-Glu-+ H+ ---> GABA + C02), and compared to many free amino acids is \npresent in high concentrations in plant cells. GABA levels rise rapidly and \ndramatically in response to varied stress conditions including anaerobiosis. \nRecent papers suggest that GABA production and associated H+ consumption are \nparts of a metabolic pH-stat mechanism which ameliorates the intracellular pH \ndecline associated with anaerobiosis or other treatments. To test this hypothesis \nGABA production and efflux have been measured in isolated Asparagus sprengeri \ncells in response to three treatments which potentially cause intracellular \nacidification. Acid loads were imposed using 60 min of (i) anaerobiosis, (ii) H+/LGlu- \ncotransport, and (iii) treatment with permeant weak acids (butyric, acetic and \npropionic). Both intra- and extracellular GABA concentrations increased more than \n100% after anaerobiosis, almost 1000% after H+/L-Glu- cotransport (light or dark) \nand almost 5000/0 after addition of 5 mM butyric acid at pH 5.0. HPLC analysis of \namino acids indicates that as GABA concentrations increased in response to \nbutyric acid addition, glutamate concentrations decreased. Time-course studies \ndemonstrated that added butyric acid stimulates GABA production by 2800/0 within \n15 seconds. A fluorescent determination of cytosolic pH indicates that addition of \nbutyric or other weak acids resulted in a rapid reduction in cytosolic pH of 0.6 pH \nunits. The half time for the response to butyric acid addition is 2.1 seconds, \nindicating that the decline in cytosolic pH is rapid enough to account for the rapid \nstimulation of GABA production. The acid load in response to butyric acid addition \nwas assayed by measurements of 14C-butyric acid uptake. Calculations indicate \nthat GABA production accounted for 45% of the imposed acid load. The biological \nsignificance of GABA efflux is not yet understood. The results support the original \nhypothesis suggesting a role for GABA production in cellular pH regulation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.186
Teacher spread0.178 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes1
Has abstractyes

Explore more

Same venueBrock University Digital Repository (Brock University)→French-language works237,207→