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Record W7019889626

Intragenic Rescue of the Function of Long QT Syndrome-Causing Mutant hERG K+ Channels

2018· dissertation· en· W7019889626 on OpenAlexaff

Bibliographic record

VenueQSpace (Queen's University Library) · 2018
Typedissertation
Languageen
FieldMedicine
TopicCardiac electrophysiology and arrhythmias
Canadian institutionsQueen's University
Fundersnot available
KeywordshERGMutantLong QT syndromeVentricular action potentialPhenotypeMutationCardiac action potentialRepolarizationInternalization
DOInot available

Abstract

fetched live from OpenAlex

The human-ether-a-go-go-related gene (hERG) encodes the pore forming subunit of the rapidly activating delayed rectifier K+ channel (IKr), which is important for the repolarization phase of ventricular cardiac action potentials. A reduction in IKr due to a loss of hERG function can lead to long QT syndrome (LQTS). As such, there are a variety of hERG mutations known to cause LQTS. The majority of these mutations are thought to be trafficking deficient, including the G601S mutation. It has been shown that the plasma membrane (PM) expression of the G601S hERG mutant can be rescued by reduced-temperature culture. Additionally, it has been shown that hERG channels undergo rapid internalization in 0 mM K+o culture conditions, but this can also be prevented by reduced-temperature culture. Thus, the hypothesis of this thesis is that certain hERG mutants, including G601S, can traffic to the plasma membrane where they internalize due to impaired stability, similar to WT hERG channels in 0 mM K+ conditions. To test this hypothesis, a secondary mutation, S624T, which does not require K+o for stable PM expression, was added to the G601S mutant hERG channel. The addition of S624T intragenically suppressed the loss-of-function G601S phenotype and significantly rescued G601S expression and current. The addition of S624T also rescued LQTS-causing hERG mutants T474I and P596R. These data reveals the most effective intragenic rescue of LQTS-causing hERG mutants to date and lends insight into the mechanisms underlying the loss-of-function phenotype of certain LQTS-causing hERG mutants.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.192
Teacher spread0.187 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes1
Has abstractyes

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