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Record W7024650938

Selection and application of methods for the detection and enumeration of human-pathogenic halophilic vibrio spp. in seafood: guidance. Microbiological risk assessment series, 22

2016· article· en· W7024650938 on OpenAlexfundno aff

Bibliographic record

VenueInstitutional Archive of Ifremer (French Research Institute for Exploitation of the Sea) · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicVibrio bacteria research studies
Canadian institutionsnot available
FundersHealth Canada
KeywordsEnumerationSelection (genetic algorithm)HalophileRisk assessmentVibrio
DOInot available

Abstract

fetched live from OpenAlex

One of the challenges in undertaking global risk assessments for halophilic Vibrio spp. has been the availability of appropriate datasets from around the world. Such datasets need to be representative of the range of conditions under which halophilic Vibrio spp. grow and become a problem for seafood safety. Even when data are available, the different methodology used to generate that data often make it difficult to compare and consolidate globally representative datasets.\n\nThis document is intended to provide guidance to inform the selection of the most appropriate methods to generate data on Vibrio spp. in seafood. It considers the range of potential methods from culture based to molecular, and proposes the use of performance characteristics to select the most appropriate method according to the potential end use of the data generated, for example, harvest area monitoring, post-harvest process verification, end product monitoring, and outbreak investigation. Aspects of data requirements that could support national and regional risk assessments are also addressed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.026
metaresearch head score (Gemma)0.031
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.026
Threshold uncertainty score0.138

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0260.031
Meta-epidemiology (narrow)0.0020.002
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0070.003
Science and technology studies0.0010.001
Scholarly communication0.0020.002
Open science0.0040.002
Research integrity0.0040.002
Insufficient payload (model declined to judge)0.0050.012

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.047
GPT teacher head0.391
Teacher spread0.344 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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Same venueInstitutional Archive of Ifremer (French Research Institute for Exploitation of the Sea)Same topicVibrio bacteria research studiesFrench-language works237,207