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Record W7029924264

Measurement of cellular adhesions and adhesion protein dynamics using tracking paired with spatio-temporal image correlation spectroscopy

2017· dissertation· en· W7029924264 on OpenAlexfundno aff

Bibliographic record

VenueeScholarship@McGill (McGill) · 2017
Typedissertation
Languageen
FieldMedicine
TopicMedical and Health Sciences Research
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of CanadaMcGill University
KeywordsFluorescence correlation spectroscopyCytoskeletonFocal adhesionDigital image correlationDynamics (music)Cell migrationActin cytoskeletonAdhesionProtein subcellular localization predictionCell
DOInot available

Abstract

fetched live from OpenAlex

Proteins are ubiquitous in biological systems and while much is known about protein structure, less is known about the movement of these proteins.The phenomenon of movement also occurs at the cellular level through cell migration and, in particular, cells depend upon the movement of proteins to enable cell motility.More precisely, cell migration is dependent upon cytoskeletal structures, including focal adhesions, complexes which include multiple proteins and enable cells to exert forces upon the underlying substrate and migrate.The basic structure and components of the cytoskeleton are fairly well known, yet much less is known about their dynamic assembly and disassembly.Motile cells are known to be involved in numerous biological processes and thus studying the flow of proteins involved in cell migration has the potential to clarify their roles and lead to a more advanced understanding of cell migration.Major protein components that play a role in the formation of focal adhesions have been identified.Using genetically engineered fluorescent variants of these proteins, we can image cells expressing fluorescently-tagged proteins via fluorescence microscopy, and thereby obtain quantitative results on the location and movement of key proteins of interest in migrating cells.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.055
GPT teacher head0.320
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

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