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Record W7054399454

Alterations in the neuromuscular junction proteome with aging

2015· dissertation· en· W7054399454 on OpenAlexfundno aff

Bibliographic record

VenueeScholarship@McGill (McGill) · 2015
Typedissertation
Languageen
FieldEngineering
TopicLaser Design and Applications
Canadian institutionsnot available
FundersCanadian Institutes of Health ResearchMcGill University Health CentreMcGill University
KeywordsReinnervationDenervationNeuromuscular junctionAtrophyMuscle atrophyDecorinLaser capture microdissectionSynapse
DOInot available

Abstract

fetched live from OpenAlex

Denervation has remained a principal factor of age-related muscle atrophy since a report noted significant changes in the end plate morphology at the aged neuromuscular junction [1]. The mechanisms behind the impaired/failed reinnervation and increased denervation seen in aging muscle are not fully understood; however evidence points to an increase in the destabilization of the neuromuscular junction (NMJ). We hypothesized that alterations in the proteome of the NMJ are the primary factors driving the age-associated degeneration and destabilization of the NMJ leading to the impaired/failed reinnervation and increased denervation. Our study utilized Fisher 334 x Brown Norway F1-hybrid rats at an age associated with a striking degree of muscle atrophy [2-4]. We collected NMJ containing muscle fiber segments using laser capture microdissection from 9 young adult (YA) and 9 senescent (SEN) rats. We also used the Sarco mouse as a model of sporadic denervation to separate the effects of denervation from aging. LC-MS/MS analysis revealed both increases and decreases in protein abundances at the aged NMJ. Four and a half lim domains protein 1 was the most overall up-regulated protein at the SEN NMJ and has been linked to Wnt3a which inhibits rapsyn expression and negatively regulates AChR clustering. The intermediate filament desmin and the ECM components decorin and prolargin were all up-regulated at the SEN NMJ and can be classified as specific to aging, potentially as a result of failed reinnervation. We hypothesize that increases in the intermediate filaments and the ECM may be a consequence of long-term denervation and an attempt to overcome the failed reinnervation that occurs with age by providing a stable anchor for AChRs and re-modeling the ECM to attract regenerating axons. Overall, our results agree with the idea that the etiology of sarcopenia is multifactorial. The proteins identified in our experiment provide insights into potential new mechanisms that contribute to the instability of the NMJ and/or failed reinnervation observed in aging muscle.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.734
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0010.000
Scholarly communication0.0000.001
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.225
Teacher spread0.209 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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