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Record W7056341770

The effects of fenretinide, a vitamin a derivative, on phenotypes of cystic fibrosis

2014· dissertation· en· W7056341770 on OpenAlexfundno aff

Bibliographic record

VenueeScholarship@McGill (McGill) · 2014
Typedissertation
Languageen
FieldEngineering
TopicParticle accelerators and beam dynamics
Canadian institutionsnot available
FundersCanadian Institutes of Health ResearchMcGill University Health CentreCystic Fibrosis CanadaMinistère du Développement Économique, de l’Innovation et de l’ExportationMcGill University
KeywordsFenretinideCystic fibrosisCeramideCystic fibrosis transmembrane conductance regulatorDocosahexaenoic acidPolyunsaturated fatty acidVitamin ELungPhenotype
DOInot available

Abstract

fetched live from OpenAlex

Cystic fibrosis (CF) is an autosomal recessive disease caused by mutations in the CF Transmembrane Conductance Regulator (CFTR). Individuals are usually diagnosed in infancy and are burdened with extensive medical treatments throughout their lives. The treatments currently available attempt to preserve lung function by addressing bacterial infections and physiological defects of the CF lung. There are many CF phenotypes not addressed by current therapies such as high levels of inflammation, high oxidative/nitrosative stress, abnormal levels of polyunsaturated fatty acids (PUFA) and defects in ceramide. Based on our preliminary studies, we hypothesized that fenretinide could address these gaps in CF treatment. Our previous studies demonstrated the protective effects of fenretinide, a derivative of vitamin A, in CF mice. The drug treatment in CF mice improved clearance of lung infections and normalized the levels of ceramide, which were abnormally low in CF. In this thesis, we show that the abnormal levels of PUFAs, arachidonic acid (AA) and docosahexaenoic acid (DHA), are associated with the defects in ceramide in CF patients. Fenretinide treatment in CF mice improved the PUFA imbalance systemically and in CF-related organs, lung, ileum, pancreas and liver. The drug also reduced the expression of inflammatory genes, IL-1β and S100A8, in the lung of CF mice. Fenretinide had prolonged normalizing effects on PUFA and ceramide levels in mice with one dose improving the lipids up to 90 hours after treatment. It also reduced the levels of malondialdehyde, a marker of lipid peroxidation, and nitrotyrosine, a marker of nitrosative stress. High levels of lipid peroxidation and nitrosative stress were correlated with greater defects in lipids. Lipids from leukocytes isolated from CF patients responded to fenretinide treatment in similar ways with a reduction in AA, and increased DHA and ceramide. Lipid peroxidation also decreased in CF cells. We also tested different formulations of the drug in monkeys and demonstrated a drug effect in yet another animal species. CF patients periodically experience worsening of their pulmonary symptoms and these events are called pulmonary exacerbations (PEx). These events impact the progression of lung disease however they are nearly impossible to prevent. We followed a cohort of CF patients during stable disease to evaluate markers associated with the risk of a future PEx. We determined that at stable disease, a worse clinical picture and a lower score on the patient's quality of life assessment were related to a higher risk of a PEx. After treatment for PEx, patients with high levels of inflammation had rapidly re-exacerbated. We discovered that the aggressive treatments used during PEx decreased inflammatory markers but also improved the defects in PUFA by decreasing AA and increasing DHA. Additionally, treatments for PEx reduced the levels of malondialdehyde and nitrotyrosine, however they are not feasible for chronic use unlike fenretinide. Fenretinide has been used in long-term cancer prevention trials. The reported side-effects were minimal and reversible with short drug-free intervals. The results in this thesis show the impact of fenretinide on improving lipid defects, reducing inflammation and normalizing high levels of lipid peroxidation and nitrosative stress. These phenotypes are not currently addressed in routine CF therapy thus fenretinide is a good candidate for future clinical trials.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.208
Teacher spread0.202 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

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