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Record W7070058402

Occurence of Fusarium equiseti Corda (Saccardo) as causal agent of seed rot of Hyssopus officinalis L.

2022· article· en· W7070058402 on OpenAlexaboutno aff

Bibliographic record

VenueFiVeR (Institute of Field and Vegetable Crops, Novi Sad, Serbia) · 2022
Typearticle
Languageen
FieldComputer Science
TopicComputational Physics and Python Applications
Canadian institutionsnot available
Fundersnot available
KeywordsPotato dextrose agarMyceliumCarnationSeedlingFusariumConidiumAgarDry rot
DOInot available

Abstract

fetched live from OpenAlex

Hyssop (Hyssopus officinalis L.) is a perennial polymorphous plant species with essential oil mainly accumulated in the flowers and leaves. It is grown in Serbia for the needs of pharmaceutical companies and tea production, because of its quality and chemical composition. During a routine quality control of hyssop seeds collected from Rumenka (Vojvodina Province), in 2018, fungal infection followed by seed rot was noticed on an average of 22%. Infected seeds were covered with white mycelium followed with violet pigmentation occurring under the seeds. The presence of Fusarium spp. was confirmed with microscopic observation. Isolation was done aseptically by arranging infected seeds onto surface of potato dextrose agar (PDA), and incubated at 25 °C with a 12-h photoperiod (Mathur and Kongsdall, 2003). After seven days, 12 Fusarium spp. isolates were designated as JBL 4003/1 - 4003/12. Pathogenicity test was performed in vitro using a modified agar slant method in the test tube with PDA amended. After 10 days, fungal mycelia of tested isolates caused seed rot and seedling decay, like naturally infected hyssop seeds. All isolates were re-isolated and sub-cultured on Potato Dextrose Agar (PDA) and Carnation Leaf Agar (CLA) using a hyphal tip transfer technique, fulfilling Koch's postulates. Isolate JBL 4003/1 was distinguished based on pathogenicity and cultural characteristics. It caused seed rot after four days, on PDA colony was fast growing reaching 6-8 cm in diam. in five days, forming abundant, whitish to peach aerial mycelium followed with beige to light brown pigmentation in agar. Isolate formed relatively long and narrow macroconidia (24 to 54 × 3.2 to 4.5 μm) with a tapered and elongated apical cell and prominent foot-shaped basal cell, with four to six septate, with no microconidia. Chlamydospores were solitary and intercalary. Based cultural and morphological characteristics indicated that the isolate belong to species Fusarium equiseti Corda (Saccardo). To obtain a DNA sequence-based identification, total DNA was extracted directly from the mycelium. Following DNA extraction, the translation elongation factor 1-alpha region was amplified by PCR using the primer pair EF1 and EF2. The amplified and purified DNA fragment of chosen isolate JBL4003/1 was sequenced in both directions and deposited in the GeneBank under Accession Number MK061540.1. BLAST analysis revealed that the Serbian isolate MK061540 showed the highest nucleotide identity of 100% with F. equiseti isolates from United States (MG826890), Canada (KU587617), Turkey (KT286761), and Serbia (JQ412101). Based on morphological and pathogenic properties, as well as the sequence analysis, to our knowledge, this is the first case of F. equiseti Corda (Saccardo) as the causal agent of Hyssopus officinalis (L.) seed rot in Serbia. Considering the importance of H. Officinalis in pharmaceutical industries, knowledge of the composition of populations of Fusarium species transmitted by hyssop.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.499
Threshold uncertainty score0.600

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.249
Teacher spread0.234 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2022
Admission routes1
Has abstractyes

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