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Record W7074087808

CCAAT/enhancer binding protein β regulates expression of matrix metalloproteinase-3 in arthritis

2012· article· en· W7074087808 on OpenAlexfundno aff

Bibliographic record

VenueInstitutional Repositories DataBase (IRDB) · 2012
Typearticle
Languageen
FieldEconomics, Econometrics and Finance
TopicDiverse Scientific and Economic Studies
Canadian institutionsnot available
FundersJapan Society for the Promotion of ScienceShriners Hospitals for ChildrenMcGill University
KeywordsArthritisPlasma protein bindingBinding proteinExpression (computer science)Matrix (chemical analysis)DNA-binding proteinRheumatoid arthritis
DOInot available

Abstract

fetched live from OpenAlex

Objectives: To investigate whether CCAAT/enhancer-binding protein β (C/EBPβ) mediates expression of matrix metalloproteinase-3 (MMP-3) and aggrecanases in arthritis.Methods: Localization of C/EBPβ and MMP-3 in synovium and cartilage from rheumatoid arthritis and osteoarthritis patients was determined by immunohistochemistry. Cell lines, SW982, C28/I2 and human fibroblast-like synoviocytes stimulated by IL-1β were subjected to western blotting and quantitative polymerase chain reaction.Over-expression of C/EBPβ by adenovirus was performed in cells and organ culture of normal cartilage.Knockdown of C/EBPβ by small interference RNA was performed in cells.Activity of the human MMP-3 and aggrecanase-2 (ADAMTS-5) promoters was analyzed by a luciferase assay.To determine whether C/EBPβ directly binds to the MMP-3 or ADAMTS-5 promoter, a chromatin immunoprecipitation (ChIP) assay was performed.Results: Immunohistochemistry showed that C/EBPβ and MMP-3 were co-localized in arthritic synovium and cartilage.Western blots revealed increased C/EBPβ expression in cells treated with IL-1β.Expression of MMP-3, MMP-13, and ADAMTS-5 mRNA was significantly increased by the over-expression of C/EBPβ.C/EBPβ stimulated MMP-3 expression and induced matrix degradation in cartilage explants.C/EBPβ knockdown reduced MMP-3 and ADAMTS-5 expression.C/EBPβ stimulated the 2011 bp MMP-3 promoter and the 1768 bp ADAMTS-5 promoter in a dose-dependent manner.Deletion and mutation analysis of the MMP-3 promoter revealed that the C/EBPβ core responsive element was located between -108 bp and -100 bp.A ChIP assay showed that C/EBPβ directly bound to MMP-3 and ADAMTS-5 promoters.Conclusions: These data demonstrate that C/EBPβ is involved in expression of MMP-3 and ADAMTS-5 in arthritic synovium and cartilage.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.236
Teacher spread0.206 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2012
Admission routes1
Has abstractyes

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