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Record W7092182713 · doi:10.5281/zenodo.17367124

napari: a multi-dimensional image viewer for Python

2025· other· W7092182713 on OpenAlexaff

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2025
Typeother
Language
FieldBiochemistry, Genetics and Molecular Biology
TopicCell Image Analysis Techniques
Canadian institutionsInnovation Cluster (Canada)
Fundersnot available
KeywordsZoomPython (programming language)Image file formatsFile formatImage editing

Abstract

fetched live from OpenAlex

napari 0.6.6 Wed, Oct 15, 2025 We're happy to announce the release of napari 0.6.6! napari is a fast, interactive, multi-dimensional image viewer for Python. It's designed for browsing, annotating, and analyzing large multi-dimensional images. It's built on top of Qt (for the GUI), vispy (for performant GPU-based rendering), and the scientific Python stack (numpy, scipy). For more information, examples, and documentation, please visit our website, https://napari.org. napari follows EffVer (Intended Effort Versioning); this is a Meso release containing awesome new features, but some effort may be needed when updating previous projects to use this version. Highlights This a small bugfix release, following up the changes in 0.6.5. Zooming in the dark? In the previous release we accidentally made the zoom tool added in v0.6.3 invisible. Whoops! No worries, it's back 🔍. "Open with napari" When using the napari bundle, it will now detect when a file can be opened with napari based on the extension. This allows you to use the open with > menu from your operative system to open files with napari! PS: Since we did quite a few changes behind the scenes on this new version of the bundle, you might experience some issues. Don't hesitate to open an issue or contact us on zulip if you do! Improvements Update menuinst configuration with file type associations (#8359) Bug Fixes Fix shape selection in a single plane when shapes are on multiple planes (#8335) Fix invisible zoom box (#8344) Bump console version to fix ipykernel bug (#8360) Build Tools Bump console version to fix ipykernel bug (#8360) Documentation Update release notes v0.6.6 (docs#868) Add info about manual trigger of conda update to release guide (docs#859) Fix version switcher for 0.6.5 (docs#861) Remove trailing comma in version switcher json (docs#862) Add release notes for v0.6.6 (docs#866) Update release notes v0.6.6, the revenge (docs#869) Other Pull Requests Add a new attr_to_settr utility function and simplify layer control widgets layer to widget setup (#8274) [pre-commit.ci] pre-commit autoupdate (#8275) ci(dependabot): bump the actions group with 9 updates (#8324) Delay settings import to avoid circular import (#8327) Add info about conda forge manual trigger to release checklist (#8328) Add sponsor badge and reorganize badges into groups (#8343) Fix vispy error traceback (#8346) Migrate license settings to modern standards (#8350) 7 authors added to this release (alphabetical) (+) denotes first-time contributors 🥳 Daniel Althviz Moré - @dalthviz Grzegorz Bokota - @Czaki Jaime Rodríguez-Guerra - @jaimergp Juan Nunez-Iglesias - @jni Lorenzo Gaifas (docs) - @brisvag Peter Sobolewski - @psobolewskiPhD Tim Monko (docs) - @TimMonko 8 reviewers added to this release (alphabetical) (+) denotes first-time contributors 🥳 Carol Willing - @willingc Daniel Althviz Moré - @dalthviz Grzegorz Bokota - @Czaki Juan Nunez-Iglesias - @jni Lorenzo Gaifas (docs) - @brisvag Melissa Weber Mendonça - @melissawm Peter Sobolewski - @psobolewskiPhD Tim Monko (docs) - @TimMonko

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Science and technology studies, Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.199
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0020.000
Scholarly communication0.0010.000
Open science0.0020.003
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0380.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.275
Teacher spread0.257 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2025
Admission routes1
Has abstractyes

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