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Record W7104656050 · doi:10.5061/dryad.zs7h44j9b

Data from: Avoiding dead ends: the experimental evolution of constraint as adaptation to environmental variation

2022· dataset· en· W7104656050 on OpenAlexaff

Bibliographic record

VenueDRYAD · 2022
Typedataset
Languageen
Field
Topic
Canadian institutionsCarleton University
Fundersnot available
KeywordsReplicateConstraint (computer-aided design)Selection (genetic algorithm)Experimental evolutionTraitAdaptation (eye)Measure (data warehouse)Shock (circulatory)

Abstract

fetched live from OpenAlex

A bet-hedging strategy is suboptimal over short timescales, but optimal over long time scales because it buffers temporal variance in fitness. However, it is unclear how such strategies can persist when selection is expected to purge suboptimal traits in the short term. It has been proposed that the persistence of bet hedging is possible only if adaptive evolution is constrained in the short-term (Simons, 2002). To test the constraint-as-adaptation hypothesis, we take an experimental evolution approach using Saccharomyces cerevisiae and predict that evolution under reduced-frequency detrimental events results in an increase in evolution-resistant bet-hedging. Specifically, we evolve bet-hedging by imposing fluctuating selection through repeated heat shocks separated by intervening benign environments in which the frequency of extreme environments is reduced across two sequential evolution regimes (Regimes A and B). Then, to measure evolved constraints lines from both regimes are further evolved under extended benign conditions for ~150 generations and tested for the loss of heat shock tolerance. This dataset provides heat shock tolerance and competitive fitness data for replicate lines evolved in both regimes, and for the T1 ancestor. This dataset also provides these trait measurements after the replicate lines from both regimes are further evolved under extended benign conditions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.161
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0380.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.054
GPT teacher head0.296
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

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