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Record W7111869769

Molecular detection, risk factor and public awareness of avian bornavirus from captive and non-captive birds in Peninsular Malaysia

2021· other· en· W7111869769 on OpenAlexaboutno aff

Bibliographic record

VenueUniversiti Putra Malaysia Institutional Repository (Universiti Putra Malaysia) · 2021
Typeother
Languageen
Field
Topic
Canadian institutionsnot available
Fundersnot available
KeywordsDiseaseRisk factorCaptivityPolymerase chain reactionPrevalenceDigestive tract
DOInot available

Abstract

fetched live from OpenAlex

Proventricular dilatation disease (PDD) is a fatal disorder and one of the threatening diseases among captive birds and wild birds. This disease is caused by avian bornavirus (ABV) which belongs to the family of Bornaviridae. ABV has been identified in psittacine and non-psittacine birds as well as waterfowls. Birds with PDD may show signs of gastrointestinal tract deficit (e.g., weight loss, regurgitation, passage of undigested food in faeces), or neurological dysfunction (e.g., ataxia, abnormal gait, proprioceptive defects) or even both. ABV is also present in healthy birds with no clinical signs of PDD. ABV infections have been reported in several countries such as Japan, Brazil, Thailand, South Africa, Germany, Canada, Denmark and North-eastern USA among the group of captives as well as free ranging birds of clinically diseased or healthy birds. Among five species of ABV, Parrot bornavirus (PaBV) 2 and 4 in the group species of Psittaciform 1 bornavirus are the most notably causing the disease. In Malaysia, there was no study of ABV reported in captive as well as wild birds. Therefore, three main objectives of this study were: 1) To determine the molecular prevalence of avian bornavirus in captive and wild birds in Peninsular Malaysia by nucleic acid detection through reverse transcription polymerase chain reaction (RT-PCR) assay by targeting the M gene; 2) To determine the risk factors associated with ABV infection among captive and non-captive birds that was molecularly detected positive and 3) To assess the level of public awareness on ABV and its associated diseases via a set of knowledge, attitude, practice (KAP) questionnaires.. Total of 344 cloacal swabs or faeces were collected from various species of captive and non-captive birds at various regions of Peninsular Malaysia, and were subjected to detection of ABV using RT-PCR assay. The positive amplicons were subjected for sequencing for ABV genotypes analyses. Meanwhile, online KAP questionnaires were distributed by using google form platform to the pet bird’s owners. Molecular prevalence studies revealed that 4.5% (9/201) of pet birds were ABV positive with two birds were presenting PDD-like signs and the other seven birds were healthy and had no outward clinical signs of PDD, whereas 0% (0/143) in waterfowls. From the 9 positive pet birds, all were identified to be PaBV-2, which is closest to ABV isolates EU781967 originated from USA. Among the risk factors analyzed, several risk factors which include the category, family, species, age, place as well as management are found to show association with the ABV positivity among the birds. Besides that, a total of 87% (158/181) of respondents were interviewed regarding the diseases (ABV, PDD) using the KAP questionnaires. The majority of respondents have low knowledge on ABV and PDD with a percentage of 32.9% answered correctly. However, they showed a positive attitude and good practice with a total percentage of 60.8% and 94.9% respectively. Meanwhile, the association between knowledge, attitude and practice showed that there was a significant association between knowledge-attitude and also attitude-practice (p<0.05). In conclusion, this study proved that avian bornavirus (ABV) causes proventricular dilatation disease (PDD) among a group of pet birds is present in Peninsular Malaysia but at low prevalence rate. Furthermore, in addition to the useful databases obtained from this study, the level of public awareness on the importance of avian bornavirus that causes fatal disorder among a wide range of bird species is satisfactorily achieved.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Science and technology studies, Research integrity, Insufficient payload (model declined to judge)
Consensus categoriesMeta-epidemiology (narrow)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.331
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0020.003
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0050.003
Science and technology studies0.0010.003
Scholarly communication0.0000.002
Open science0.0010.001
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.207
Teacher spread0.196 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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Same venueUniversiti Putra Malaysia Institutional Repository (Universiti Putra Malaysia)French-language works237,207