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Record W7112403160

Dissolved Organic Carbon in Organic-Rich Aquatic Ecosystems: Biodegradability and an Assessment of the Priming Effect

2018· dissertation· en· W7112403160 on OpenAlexaboutno aff

Bibliographic record

VenueDigiNole (Florida State University) · 2018
Typedissertation
Languageen
FieldEarth and Planetary Sciences
TopicMarine and coastal ecosystems
Canadian institutionsnot available
Fundersnot available
KeywordsDissolved organic carbonBiodegradationOrganic matterMesocosmNutrientAquatic ecosystemBlackwaterBiogeochemical cycle
DOInot available

Abstract

fetched live from OpenAlex

Rivers deliver approximately 260 Tg of dissolved organic carbon (DOC) to the ocean annually, yet there is little evidence of terrigenous DOC (tDOC) in the ocean. While tDOC was historically believed to be stable and resistant to microbial degradation, it has recently been shown that freshwater systems mineralize more tDOC than originally thought. Biodegradability of DOC is an overriding control on ecosystem respiration, regulating how much organic carbon is remineralized as CO2 or exported downstream, however, the processes controlling DOC degradation are not well understood. The priming effect is a possible mechanism by which inputs of biolabile DOC enhance the bioavailability of stable DOC components in aquatic systems, resulting in higher rates of microbial remineralization. Here we investigate microbial degradation of DOC by conducting bioincubation experiments and assessing a variety of biogeochemical controls on DOC biolability, including the priming effect, nutrient availability, seasonality, and chemical composition. The role of priming and nutrient availability was assessed through the inclusion of bioincubation treatments amended with nutrients and a variety of simple biolabile organic carbon substrates. Ultrahigh resolution mass spectrometry allowed us to characterize the molecular composition of dissolved organic matter (DOM) samples and understand how chemical composition may act as a driver of DOM biodegradability. This study was first conducted on blackwater systems in Florida, where we collected blackwater river samples and made leachates from plant litter that largely contributes to the terrestrial input of organic matter in these systems. Blackwaters consist of a diverse mixture of organic substances and are ideal study sites for assessing biodegradability of DOC and priming as they are rich in organic matter (i.e. high DOC concentrations), dominated by DOM that is highly aromatic in nature, and are historically believed to be a stable DOM pool. During the bioincubation experiments, blackwaters lost 6.10 ± 3.85% DOC within one month, while leachates lost 38.10 ± 16.74% DOC. There were no significant differences between DOC remineralization in control and ‘primed’ treatments, indicating that priming is not an important factor in the biodegradation of DOC in blackwater ecosystems. However, the proportion of biodegradable DOC (BDOC) and DOM composition were significantly correlated, mostly driven by the contribution of aliphatic compounds (H/C ≥ 1.5, O/C < 0.9) that were abundant (9.3 ± 5.2%) in leachate DOM. The molecular signature of biodegraded leachate DOM resembled that of stable blackwater DOM, indicating that bioavailable DOM components leached from plant litter are rapidly utilized and stable DOM is exported downstream. Further, we conducted this study on permafrost-influenced streams in the Yukon Flats of Interior Alaska, a region underlain by discontinuous permafrost that is experiencing rapidly warming temperatures, permafrost thaw, and associated changes in hydrology and vegetation, all which affect the biodegradability and fate of DOC. Permafrost-influenced streams may also be sites of ‘priming effects’ as biolabile, ancient permafrost DOC mixes with relatively modern, stable stream DOC. To determine the vulnerability of DOC in this region to microbial degradation, we conducted 28-day bioincubation experiments utilizing a suite of stream samples and leachates made from fresh ground vegetation and several soil layers collected at different depths, including permafrost. Microbial utilization of stream DOC ranged from 4 to 11% in spring and differences were likely influenced by site drainage characteristics. Leachate DOC followed a continuum of biodegradability, losing from 9% (mineral soil-derived) to as much as 66% (vegetation-derived) DOC. Nutrient availability rather than priming controlled DOC remineralization, especially for fall stream samples and mineral soil leachates. Seasonally, it appears that DOC biodegradability and aromaticity decrease into fall. The molecular composition of DOM determined by ultra-high resolution mass spectrometry was significantly correlated to DOC biodegradability, particularly the contribution of aliphatic compounds. Stream microbial communities utilized 50-56% of aliphatic compounds in permafrost-derived DOM within 28 days. We also found evidence for selective preservation of aromatic DOM compounds with depth in soil horizons. Our findings imply that future climate-driven changes (e.g. temperature, nutrient supply, and vegetation) in discontinuous permafrost regions may cause the release of biolabile DOM that is rapidly respired, resulting in a positive feedback with climate change.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.385
Threshold uncertainty score0.991

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.209
Teacher spread0.202 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes1
Has abstractyes

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