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Record W7115167152 · doi:10.26434/chemrxiv-2025-z48s0

Comparative Analysis of Conventional Cell Lysis Techniques to Electrochemical Cell Lysis using the Liquid Microjunction Surface Sampling Probe

2025· article· W7115167152 on OpenAlexafffund

Bibliographic record

VenueChemRxiv · 2025
Typearticle
Language
FieldChemistry
TopicAnalytical chemistry methods development
Canadian institutionsQueen's University
FundersNatural Sciences and Engineering Research Council of CanadaCanada Foundation for Innovation
KeywordsLysisBiomoleculeLysis bufferSonicationReagentSample preparationCell disruptionElectrochemistry

Abstract

fetched live from OpenAlex

Cell lysis is a critical step in the analysis of cellular components, influencing the efficiency, reproducibility, and integrity of biomolecular extractions. Conventional lysis techniques, including mechanical and chemical methods, often present trade-offs between throughput, scalability, and sample integrity. Mechanical approaches such as bead milling and sonication can efficiently disrupt cells but suffer from issues such as back-mixing and biomolecule degradation. Chemical lysis techniques, while effective at preserving nucleic acids, require additional purification steps to remove residual chemicals that may interfere with downstream analyses. Electrochemical lysis (ECL) has emerged as a promising alternative, leveraging the electrochemical lysis of phosphate buffered saline (PBS) to induce membrane disruption at low potentials (2 to 5 V). ECL minimizes sample perturbation and aligns with green chemistry principles by reducing solvent and reagent consumption. This study evaluates ECL alongside conventional cell lysis methods using microbiological, electrochemical, and mass spectrometry (MS) analyses, using the Liquid Microjunction Surface Sampling Probe (LMJ SSP) for MS data acquisition. Cell lysates prepared using ECL were more reproducible samples abundant in diverse biomolecules compared to conventional methods. The integration of ECL with the LMJ SSP- MS has enabled rapid biochemical characterization with minimal sample preparation, direct sample introduction, and improved workflow efficiency.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.341
Teacher spread0.300 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

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