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Record W7116431507 · doi:10.1186/s40068-025-00414-6

A high throughput ambient mass spectrometric approach for identifying the poaching of wild american ginseng

2025· article· en· W7116431507 on OpenAlexafffund
J. Richard Shaw, Pamela Brunswick, Jolene Lesuk, Lola Rabinovitch, Taylor Filewood, Honoria Kwok, Jeffrey Yan, Robert B. Cody, Tao Huan, Dayue Shang

Bibliographic record

VenueENVIRONMENTAL SYSTEMS RESEARCH · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGinseng Biological Effects and Applications
Canadian institutionsEnvironment and Climate Change CanadaUniversity of British Columbia
FundersEnvironment and Climate Change CanadaNatural Sciences and Engineering Research Council of CanadaUniversity of British Columbia
KeywordsGinsengThroughputPoachingMass spectrometry

Abstract

fetched live from OpenAlex

Abstract Rapid identification is critically important in the protection of endangered species listed under the Convention on International Trade in Endangered Species (CITES). One such species is American ginseng ( Panax quinquefolius ), whose remaining wild populations are vulnerable to the effects of poaching. Direct Analysis in Real Time Time-of-Flight Mass Spectrometry (DART-ToF MS) is a mature but underutilized forensic tool suitable for rapidly analyzing plant materials. This tool offers greater convenience over alternative species identification methods commonly requiring extensive sample preparation and instrument run times. In the current study, four categories of ginseng, including wild and cultivated American ginseng, Korean ginseng ( P. ginseng ), and Chinese ginseng ( P. notoginseng ), were analyzed by DART-ToF MS. The collected mass spectra were visually compared by heat map prior to application of multivariate statistical analysis to cluster sample groups, yielding a two-step identification model capable of identifying the origin of blind quality assurance samples. With fast sample preparation, data acquisition, and statistical analysis, DART-ToF MS shows great potential as a forensic screening tool in combating poaching and illegal trade of endangered and CITES-listed species such as wild American ginseng.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.038
GPT teacher head0.341
Teacher spread0.302 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

Explore more

Same venueENVIRONMENTAL SYSTEMS RESEARCHSame topicGinseng Biological Effects and ApplicationsFrench-language works237,207