MétaCan
Menu
Back to cohort
Record W7116740134 · doi:10.1128/mra.01001-25

Complete genome sequence of <i>Caulobacter vibrioides</i> CB2A JS4038

2025· article· en· W7116740134 on OpenAlexaff
Beth Davenport, Ryan J. McLaughlin, Tony Liu, Steven Hallam

Bibliographic record

VenueMicrobiology Resource Announcements · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicVibrio bacteria research studies
Canadian institutionsGenome British ColumbiaHudbay Minerals (Canada)University of British Columbia
Fundersnot available
KeywordsWhole genome sequencingSequence (biology)GenomeReference genomeComplete sequenceDNA sequencingSequence assemblyGenome project

Abstract

fetched live from OpenAlex

ABSTRACT We report the complete genome sequence of Caulobacter vibrioides CB2A JS4038. This strain is a variant of C. vibrioides CB2A containing genotypic changes needed to host a plasmid-encoded S-layer display system. PacBio long-read sequencing and assembly provide a closed reference genome, constraining the chromosomal location of these changes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.917
Threshold uncertainty score0.944

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.277
Teacher spread0.260 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

Explore more

Same venueMicrobiology Resource AnnouncementsSame topicVibrio bacteria research studiesFrench-language works237,207