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Record W7116834384 · doi:10.1038/s41598-025-32967-y

SARS-CoV-2 outbreaks in long-term care facilities during the Omicron era in Québec, Canada

2025· article· en· W7116834384 on OpenAlexafffundabout
Radhouene Doggui, Manale Ouakki, Annick Boulais, Geneviève Deceuninck, Rodica Gilca, Etienne B. Racine, Christine Lacroix, Élise Fortin

Bibliographic record

VenueScientific Reports · 2025
Typearticle
Languageen
FieldHealth Professions
TopicGeriatric Care and Nursing Homes
Canadian institutionsUniversité de MontréalUniversité de SherbrookeCentre hospitalier universitaire de QuébecUniversité LavalInstitut National de Santé Publique du Québec
FundersMinistère de la SantéMinistère de la Santé et des Services sociauxInstitut National de Santé Publique du Québec
KeywordsOutbreakCase fatality rateOdds ratioIncidence (geometry)Rate ratioTransmission (telecommunications)Ecological studyEpidemiology

Abstract

fetched live from OpenAlex

Residents of long-term care facilities (LTCFs) are at a high risk of severe COVID-19. Our study analyzed the COVID-19 outbreaks, associated cases and case fatality ratio (CFR) in LTCFs from May-2022 to September-2024 in Québec, Canada. An ecological analysis was conducted including all active LTCFs during the study period (n = 471). Regression analyses using generalized estimating equations were used to model odds of an active COVID-19 outbreak, confirmed COVID-19 cases incidence rate ratio (IRR) and ratio of CFR over different periods (wave 7, 2022-23 season, 2023-24 season), regions and LTCF bed capacity. A total of 2,501 outbreaks were recorded, corresponding to 39,089 COVID-19 cases (among residents and health care workers). The odds of an active outbreak, IRR of COVID-19 cases, and ratio of CFR declined significantly during the 2023-24 season compared to wave 7 (-35%, -39% and -24%, respectively; p-values < 0.0001). While larger LTCFs (≥ 40 beds) were up to 7 times more likely to have an active outbreak vs.10-39 beds, COVID-19 IRR and ratio of CFR were comparable across LTCFs' bed-capacity. In summary, the burden of COVID-19 on LTCF residents has declined from May 2022 to September 2024. Bed capacity seems to predict outbreak occurrence but not virus transmission within LTCFs.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.017
Threshold uncertainty score0.127

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.002
Science and technology studies0.0010.001
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.325
Teacher spread0.309 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes3
Has abstractyes

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