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Record W7117107613 · doi:10.64898/2025.12.19.695392

Antifungal susceptibility profile of clinically relevant species of the genus <i>Sporothrix:</i> establishment of Epidemiological Cutoff Values (ECVs) according to CLSI broth microdilution methodology

2025· article· W7117107613 on OpenAlexaff
Amanda Ribeiro dos Santos, A Bonifaz, Amanda Bombassaro, Ana Caroline de Sá Machado, Anderson Messias Rodrigues, Arunaloke Chakrabarti, Anuradha Chowdhary, Bruno Carneiro Rediguieri, Elizabeth M Johnson, Ferry Hagen, Gloria M. González, Guillermo García-Effron, Isabella Dib Ferreira Gremião, Jacques F. Meis, Juliana Possato Fernandes Takahashi, Luana Pereira Borba-Santos, Paola Cappellano, RSN Brilhante, Sandro Antônio Pereira, Sarah Santos Gonçalvez, Sarah Kidd, Sean X. Zhang, Shivaprakash M Rudramurthy, Sônia Rozental, Susana Córdoba, Theun de Groot, W Liu, Nathan P. Wiederhold, Eelco F. J. Meijer, Shawn R. Lockhart, Philippe J. Dufresne

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typearticle
Language
FieldMedicine
TopicFungal Infections and Studies
Canadian institutionsInstitut National de Santé Publique du Québec
FundersCenters for Disease Control and Prevention
KeywordsPosaconazoleItraconazoleBroth microdilutionTerbinafineAmphotericin BAntifungal

Abstract

fetched live from OpenAlex

Abstract Sporotrichosis is a globally distributed subcutaneous mycosis caused mainly by Sporothrix brasiliensis , S. schenckii , and S. globosa . Cat-transmitted sporotrichosis, primarily caused by S. brasiliensis in South America and to a lesser extent by S. schenckii in Southeast Asia, is emerging as a significant public health concern, due its outbreak potential. Itraconazole is the first-choice drug for treatment of human and cats, but reduced susceptibility has been reported based on previously proposed epidemiological cut-off values (ECVs). To support resistance surveillance, we aimed to establish CLSI-endorsed ECVs for these clinically relevant Sporothrix species. A total of 3,588 minimum inhibitory concentration (MIC) values for seven antifungal agents (amphotericin B, itraconazole, posaconazole, voriconazole, isavuconazole, olorofim, and terbinafine) were obtained from 19 international laboratories. Four of seven antifungals met the CLSI M57 guidelines criteria to determine the ECV. Established ECVs for amphotericin B were found to be high with 8 µg/mL for S. brasiliensis and S. globosa , and 4 µg/mL for S. schenckii . Itraconazole ECVs were 4 µg/mL for S. brasiliensis and S. schenckii . Posaconazole ECVs were 4 µg/mL for all three species (tentative for S. globosa ), while the terbinafine ECV for S. brasiliensis was 0.12 µg/mL. Olorofim demonstrated good in vitro activity, particularly against S. brasiliensis . Overall, this study establishes validated ECVs for key antifungals against Sporothrix species and identifies a low prevalence of non-wild type (NWT) isolates, supporting ongoing antifungal resistance monitoring.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.050
GPT teacher head0.315
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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