Metabolomics and lipidomics study on serum metabolite signatures in Alzheimer's disease and mild cognitive impairment
Bibliographic record
Abstract
BACKGROUND: Alzheimer's disease (AD) and mild cognitive impairment (MCI) are leading causes of dementia in the elderly worldwide, characterized by abnormal cognition and behavior, which complicates diagnosis and treatment. Metabolites play a critical role in cellular process related to the pathogenesis of AD and MCI. However, the metabolic alterations, particularly in lipid metabolism, in AD and MCI are poorly understood. METHOD: In this study, we applied a quantitative and targeted metabolomics approach to a cohort of AD patients (n = 22), MCI patients (n = 19) and cognitively normal (CN) (n = 19) using ultra-performance liquid chromatography triple quadrupole mass spectrometry to identify metabolic changes associated with AD and MCI. RESULT: Compared to CN, we identified 32 differential metabolites in AD and 49 in MCI serum. Notably, differential metabolites related to AA, organic acid, FA, phosphatidylcholine (PC), sphingomyelin (SM) metabolism in AD and free fatty acid (FFA), acylcarnitine, PC, SM in MCI were strongly associated with cognitive level, memory, attention and execution function as evaluated by scales including Mini-Mental State Examination (MMSE), the Alzheimer's Disease Assessment Scale-cognitive Section (ADAS), the Montreal Cognitive Assessment (MoCA), the Clinical Dementia Rating (CDR), the Auditory Verbal Learning Test (AVLT) and the Trail Making Test (TMT). Pathway analysis based on the differential metabolites revealed perturbation in pathways related to phospholipid metabolism, sphingolipid metabolism, amino acids (AAs) metabolism, beta oxidation of FAs, and carnitine metabolism. Using random forest (RF), support vector machine (SVM) and Boruta analysis for classification and validated by gradient boosting (GB), logistic regression (LR) and random forest diagnostic model, we identified panels of 10 metabolites in AD and 13 metabolites in MCI that effectively discriminate AD and MCI individuals from CN with high accuracy, sensitivity and specificity. CONCLUSION: In summary, this novel study combing metabolomics and lipidomics approaches and found that perturbations in serum sphignolipids, glycerophospholipids, AAs, FFA and acylcarnitines are consistently associated with pathology and progression of AD and MCI. These metabolic biomarkers provided promising molecular targets for the early diagnosis and treatment of AD and MCI.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.001 | 0.001 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.001 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".