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Record W7120801637

Search for genes related to bacterial resistance factors in strains of Salmonella enterica subsp. enterica isolated from poultry material

2023· dissertation· pt· W7120801637 on OpenAlexfundno aff
Jorge Augusto do Amaral Werlich

Bibliographic record

VenueDigital Library of Theses and Dissertations (Universidade de São Paulo) · 2023
Typedissertation
Languagept
FieldAgricultural and Biological Sciences
TopicSalmonella and Campylobacter epidemiology
Canadian institutionsnot available
FundersCenters for Disease Control and PreventionCanadian Food Inspection Agency
KeywordsSalmonella entericaGeneSalmonellaMultiple drug resistancePathogen
DOInot available

Abstract

fetched live from OpenAlex

O Brasil destaca-se no cenário mundial da produção de carne de frango, sendo atualmente o segundo maior produtor e maior exportador desta proteína. Diante deste cenário, sob grande importância econômica, social e objetivando a oferta de alimento seguros e saudáveis, a preocupação com o controle de Salmonella torna-se assunto de grande relevância para o setor. O surgimento de cepas de Salmonella multirresistentes vem sendo apontado, porém poucos trabalhos relatam a ocorrência de resistência aos compostos desinfetantes, como o quaternário de amônio e a formalina. O presente trabalho teve como objetivo pesquisar por meio de PCR a presença dos genes Intl1, qacE, sugE e frmA em isolados de Salmonella obtidos da cadeia avícola e traçar as correlações entre a presença destes genes e a resistência a agentes antimicrobianos utilizados na avicultura. Das 36 amostras analisadas, 56% eram S. Heidelberg, 28% S. Minnesota, 13% S. spp e 3% S. Mbandaka. Destas, 34 (94,44%) apresentaram resistência a um ou mais antimicrobianos, sendo que os maiores índices de resistência foram à tetraciclina (83%), ampicilina (72%) e amoxicilina (64%). Na pesquisa de genes de resistência, nenhuma amostra foi positiva para o gene sugE, 33% apresentaram o gene qacE, seguido de 33% do gene Intl1 e 17% do gene frmA. A presença desses genes teve significância estatística (p<0.05) quando correlacionado às cepas que apresentaram resistência a 4 ou mais classes de antimicrobianos. Esses achados reforçam a ideia de que as práticas atuais de uso de medicamentos e desinfetantes na avicultura possam atuar na seleção destes patógenos.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.249
Teacher spread0.228 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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