MétaCan
Menu
Back to cohort
Record W7124136258 · doi:10.1093/biosci/biaf189

BON in a Box: An Open and Collaborative Platform for Biodiversity Monitoring, Indicator Calculation, and Reporting

2025· article· en· W7124136258 on OpenAlexafffundabout
Jory Griffith, Jean-Michel Lord, Michael Catchen, María Isabel Arce-Plata, F Guillaume Blanchet, Mathusan Chandramohan, M Camila Diaz-Corzo, Gravel Dominique, César Gutiérrez, Isabelle S. Helfenstein, Sean Hoban, Jamie M. Kass, Linda Laikre, Guillaume Larocque, Deborah M. Leigh, Brian Leung, Alicia Mastretta‐Yanes, Katie L. Millette, Maria Alejandra Molina Berbeo, Dat Nguyen, Kari Norman, María Helena Olaya-Rodríguez, Simon Pahls, Kaitlyn M. Pereira, Pedro R. Peres‐Neto, Timothée Poisot, Laura J. Pollock, Víctor J. Rincón-Parra, Claudia Roeoesli, François Rousseu, Lina María Sánchez-Clavijo, Meredith C. Schuman, Oliver Selmoni, Jessica M. da Silva, Erika Suárez-Valencia, Thilina D. Surasinghe, Eren Turak, Luis Urbina, Sarah Valentin, Noah Wightman, Maria Cecilia Londoño, Andrew González

Bibliographic record

VenueBioScience · 2025
Typearticle
Languageen
FieldComputer Science
TopicResearch Data Management Practices
Canadian institutionsConcordia UniversityUniversité de SherbrookeUniversité de MontréalMcGill University Health CentreMcGill University
FundersJapan Science and Technology AgencyInstituto de Investigación de Recursos Biológicos Alexander von HumboldtNOMIS StiftungUniversité de MontréalInternational Space Science InstituteConcordia UniversityUniversité de SherbrookeWellcome TrustMcGill University
KeywordsBiodiversityConvention on Biological DiversityMeasurement of biodiversityGlobal biodiversityConventionBiodiversity conservation

Abstract

fetched live from OpenAlex

Abstract The Convention on Biological Diversity’s Kunming–Montreal Global Biodiversity Framework (GBF) sets ambitious goals to protect and restore biodiversity. It includes a monitoring framework that mandates countries to track progress toward these goals using indicators that summarize biodiversity trends. Calculating indicators is challenging for countries because of fragmented biodiversity monitoring efforts, technical barriers, a lack of available data and tools, and capacity bottlenecks. The BON in a Box platform for biodiversity monitoring and indicator calculation, developed by the Group on Earth Observations Biodiversity Observation Network, was created to address these challenges by providing open, transparent, and reproducible analysis pipelines that convert data into essential biodiversity variables and indicators. These pipelines are built by experts and contributed by the community, follow FAIR principles, and help scientists apply their research to coordinate biodiversity monitoring efforts, build capacity to track progress toward the GBF, and affect policy change.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.032
metaresearch head score (Gemma)0.045
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesOpen science
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Software · Consensus signal: none
Teacher disagreement score0.996
Threshold uncertainty score0.178

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0320.045
Meta-epidemiology (narrow)0.0020.002
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0060.005
Science and technology studies0.0020.002
Scholarly communication0.0060.012
Open science0.0040.016
Research integrity0.0020.004
Insufficient payload (model declined to judge)0.0530.037

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.160
GPT teacher head0.430
Teacher spread0.270 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2025
Admission routes3
Has abstractyes

Explore more

Same venueBioScienceSame topicResearch Data Management PracticesFrench-language works237,207