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Record W7132114800

Novel biomarkers to guide therapy in chronic inflammatory diseases

2023· other· en· W7132114800 on OpenAlexfundno aff
I.L. Hageman

Bibliographic record

VenuePure Amsterdam UMC · 2023
Typeother
Languageen
Field
Topic
Canadian institutionsnot available
FundersInstitute of Infection and ImmunityEuropean CommissionLeona M. and Harry B. Helmsley Charitable TrustUniversiteit van AmsterdamGlaxoSmithKline
KeywordsEpigeneticsInflammatory bowel diseaseImmune systemDNA methylationDiseaseBiological response modifiersTranscriptomeInflammatory response
DOInot available

Abstract

fetched live from OpenAlex

In this thesis, we focused on the role of the epigenetic modifications in Inflammatory Bowel Disease (IBD) and other immune mediated diseases such as rheumatoid arthritis. In particular, we elaborated on aberrant DNA methylation and investigated its potential to predict therapy response to biological treatment. Furthermore, we explored other novel biomarkers to biological response with microbial signatures and single cell transcriptomics in IBD.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.011
Threshold uncertainty score0.036

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0020.001
Science and technology studies0.0000.001
Scholarly communication0.0020.001
Open science0.0000.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0110.006

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.285
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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