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Record W7132916624

Metabolic and Signaling Interactions between Mitochondria and Chloroplasts in Nicotiana tabacum Leaf

2023· dissertation· W7132916624 on OpenAlexaff
Nicole A. Alber

Bibliographic record

VenueTSpace · 2023
Typedissertation
Language
FieldBiochemistry, Genetics and Molecular Biology
TopicPhotosynthetic Processes and Mechanisms
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsChloroplastPhotophosphorylationElectron transport chainMitochondrionOrganelleOxidative phosphorylationATP synthasePhotosystem IBioenergeticsPhotosystem II
DOInot available

Abstract

fetched live from OpenAlex

Plant cells contain two organelles directly involved in energy metabolism, the chloroplast and the mitochondrion. Optimal cell function likely depends upon specific metabolic and signaling interactions between these two organelles. I used a combination of i. transgenic plant lines with modified mitochondrial electron transport chain (mETC) capacity, ii. chemical inhibitors of specific organelle ETC activities, and iii. specific treatment conditions; to generate unique metabolic and signaling states of the two organelles. This novel approach revealed that: 1. The mitochondrion is a necessary electron sink for photo-generated reductant, contributing to the “P700 oxidation capacity” of Photosystem I. 2. When the capacity of the mitochondrion to consume photo-generated reductant is limiting, the induction of non-photochemical quenching at Photosystem II depends upon PGR5/PGRL1-dependent cyclic electron transport (CET). 3. In the light, the plant cell is able to acclimate to a restriction in oxidative phosphorylation by increasing the capacity for photophosphorylation (through increased chloroplast ATP synthase amount) combined with an increase in mitochondrial electron sink capacity (through increased uncoupling protein amount). 4. CET provides an important means to optimize chloroplast ETC activities in response to changes in mitochondrial electron sink capacity. 5. The expression response of previously identified “mitochondrial dysfunction genes” is highly dependent upon the specific lesions in mitochondrial function that are applied, as well as the specific treatment conditions (e.g. light vs. dark). In part, this relates to differential effects of these lesions on chloroplast function and/or cell fate (acclimation or cell death), as well as the interconnected nature of signal transduction pathways. 6. The status of the mitochondrial ETC may be communicated to the cell, at least in part, through the generation of nitric oxide. Evidence is provided that nitric oxide can be produced in a nitrite-dependent manner at mitochondrial Complex III when the ETC is over-reduced. The results presented in this thesis provide new insight into the metabolic and signaling interactions that occur between the plant chloroplast and mitochondrion.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.316
Teacher spread0.300 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

Explore more

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