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Record W7132928661

Functional and genetic interactions of Mus81 with the Chk2-p53 tumor suppressor pathway

2007· dissertation· W7132928661 on OpenAlexaff
Ashwin Pamidi

Bibliographic record

VenueTSpace · 2007
Typedissertation
Language
FieldMedicine
TopicGenetic factors in colorectal cancer
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsCarcinogenesisGenome instabilityDNA damageSuppressorDNA repairGeneCancerMutationHomologous recombinationTumor progression
DOInot available

Abstract

fetched live from OpenAlex

The progression of a normal cell to a cancer cell is thought to involve the acquisition of several mutations that result in unregulated proliferation, improper differentiation, and increased survival phenotypes. Much of classical cancer research has focused on searching for novel genes that contribute to either tumor suppression or oncogenesis. However, since multiple mutational hits are required to drive cancer, studying the interaction and cooperation of genes in cancer progression and suppression may provide models that more accurately depict human carcinogenesis and provide new therapeutical insights. In yeast and mammalian cells, the Mus8l endonuclease plays a role in DNA repair and recombination by cleaving branched DNA substrates such as replication forks, 3'DNA flaps, and Holliday Junctions. To study the in vivo functions of mammalian Mus81, our lab generated Mus81 -/- mice, Mus81-/- mice are viable and fertile but are extremely sensitive to the interstrand crosslinking agent MMC. Significantly, Mus81+/- and Mus81-/- cells display spontaneous chromosomal damage and Mus81+/- and Mus81 -/- mice are susceptible to spontaneous tumorigenesis. These findings have identified Mus8l as an important caretaker of the genome and established it as a candidate haploinsufficient tumor suppressor. The focus of this thesis is the investigation of the genetic interplay between Mus81 and the Chk2-p53 tumor suppressor pathway in DNA repair responses and tumor suppression. This thesis demonstrates that p53 plays a critical role in eliminating damaged Mus81-/- cells. Furthermore, our findings demonstrate that dual inactivation of Mus81 and p53 results in a synergistic increase in genomic instability, accelerated tumorigenesis, and a profound predisposition for sarcoma development. Thus, Mus81 inactivation may play a critical role in human sarcoma development. Contrastingly, we found that Chk2 does not participate in eliminating DNA damaged Mus81-/- cells. Furthermore, loss of Chk2 results in a rescue of the genomic instability inherent in Mus81-/- mice and remarkably rescues the tumor susceptibility of Mus81-/- mice. Thus, our study suggests that in response to DNA damage in Mus81-/- cells, Chk2 does not mimic p53 as a gatekeeper and tumor suppressor, but instead promotes oncogenesis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.325
Teacher spread0.304 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2007
Admission routes1
Has abstractyes

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