MétaCan
Menu
Back to cohort
Record W7133006946

Mitochondrial alternative oxidase, reactive oxygen species and programmed cell death in Nicotiana tabacum

2007· dissertation· W7133006946 on OpenAlexafffund
Christine Robson

Bibliographic record

VenueTSpace · 2007
Typedissertation
Language
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Gene Expression Analysis
Canadian institutionsLibrary and Archives Canada
FundersNatural Sciences and Engineering Research Council of CanadaUniversity of Toronto
KeywordsProgrammed cell deathMitochondrionReactive oxygen speciesAlternative oxidaseHypersensitive responsePlant cellRespiratory chainApoptosisReactive nitrogen species
DOInot available

Abstract

fetched live from OpenAlex

Programmed cell death (PCD) is an integral component of many plant biological processes including senescence, xylem differentiation and as a response to both biotic and abiotic stresses. Understanding how PCD functions in plants will lead to better understanding of these important biological processes. Unlike animal PCD, plant PCD has not been well studied and as such, the mechanisms of plant PCD pathways and their regulation remain unclear. The mitochondrion is known to play an important role in the activation and regulation of many animal PCD pathways; however, the role of the mitochondrion in plant PCD is poorly understood. It could differ from that in animals, for example, due to the existence of additional electron transport chain components. One such component is the alternative oxidase (AOX), which represents a branch of the mitochondrial electron transport chain that accepts electrons from ubiquinol and catalyzes the reduction of oxygen to water. Interestingly, we found that AOX influenced the level of cellular reactive oxygen species (ROS), which strongly correlated with susceptibility to cell death induced by well-known hypersensitive response (HR)-associated signaling molecules including salicylic acid, hydrogen peroxide and nitric oxide. Investigations into the mechanisms of cell death versus those of defense pathway activation revealed that the cellular ROS level is an important determinant of the defensive threshold of the cell, which when breached, leads to PCD activation. Interestingly, our findings suggest that the mitochondrion plays a significant role in the activation of defense and death pathways through its ability to both define cellular ROS level and modulate the chemical nature and intensity of a mitochondrial-derived ROS signal. An integrative model which summarizes the role of the mitochondrion, the chemical nature of ROS signal produced, and the impact of the antioxidant network on the decision between life and death is presented. Overall, the concept that the plant can modulate death in response to the severity of the stress seems simple; however, this ability provides the plant with a great deal of flexibility to respond appropriately to an ever changing environment and may represent a basic physiological response to diverse abiotic and biotic stresses.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.069
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.320
Teacher spread0.305 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2007
Admission routes2
Has abstractyes

Explore more

Same venueTSpaceSame topicPlant Gene Expression AnalysisFrench-language works237,207